Gene Syncc9902_1860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_1860 
Symbol 
ID3742173 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp1789715 
End bp1790173 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content58% 
IMG OID637772055 
Producthypothetical protein 
Protein accessionYP_377861 
Protein GI78185426 
COG category[R] General function prediction only 
COG ID[COG0824] Predicted thioesterase 
TIGRFAM ID[TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGTTGA CGAACAAGCT GACGGACAGC GTTACGCCAA CGCCGTGGAG GTTGCAGAAG 
CGTGTTTTGC CTCAACACAC TGATCACGCG GGTGTGATGT GGCACGGGTC CTATGTGGCT
TGGCTGGAAG AAGCCAGGGT TGAGGCTTTG GTTGCTGCTG GCCTCAGCTA TGCCGAGATG
ACGATGCTGG GAGTGGAGAT GCCAGTGGTG TCTTTAAAAA TCAACTACAG ACAGGCCCTT
TGTCATGGCG ACATGGTCGT GCTGGAAAGC ATCAGCAGCC TCCCTGTTGG CGTCCGCTGG
CCTTGGCGTT GTCAGATGCT TTGCAATGGC CAGCTCATGG CCGATGCATC GGTTGAGCTC
GTCATGGTGA GCGAAGGTCG TGTTCTCCGA CGCCCACCCG GCCACCTGCA GGTTGTGATG
AACCGGCTGC GCCAAGGCCC CACAATTACG GATGCTTGA
 
Protein sequence
MVLTNKLTDS VTPTPWRLQK RVLPQHTDHA GVMWHGSYVA WLEEARVEAL VAAGLSYAEM 
TMLGVEMPVV SLKINYRQAL CHGDMVVLES ISSLPVGVRW PWRCQMLCNG QLMADASVEL
VMVSEGRVLR RPPGHLQVVM NRLRQGPTIT DA