Gene Syncc9902_1858 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_1858 
Symbol 
ID3742171 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp1787726 
End bp1788634 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content58% 
IMG OID637772053 
Productmodification methylase HemK 
Protein accessionYP_377859 
Protein GI78185424 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2890] Methylase of polypeptide chain release factors 
TIGRFAM ID[TIGR00536] HemK family putative methylases
[TIGR03534] protein-(glutamine-N5) methyltransferase, release factor-specific 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGCGGCGG CGCTGAACGT GACGACCGAG CAGTTCCTTG CTGGCAACGA CCTGCTGGCT 
TGGCGCCGTC GCCAACTTCG TCGCGGTGGA CGCTCCGTTG ATCTCGATTG GCTGCTCGAT
CTTGGCGGTG GCGTGTCCTG GTCGGAATTG CAGCGACTCC TGATTGATTC CCAGGGAAGG
ATCAAGATTG ATCAGTCATT GGAGGAGCTC GAAAAGCTTT GGCTGCTCCA TTTAGAGCGG
TCCATGCCGC TTCAGTACTT GGTTGGTGTT TGTCCTTGGC GAGATCTCCT GATCGAGGTG
TCCTCCGCGG CCTTAATTCC CCGGCAAGAA ACCGAGCTTT TGGTGGATTT GGCTTTGTCG
TTTGCGGGGG GACGCCCTCC CCGCTCTTGG GCCGACTTAG GTACGGGTTC TGGTGCAATC
GCCGTCAGCT TGTGTCGCGC ATGGCCCGAG GCTGAGGGGC ATGCCGTGGA TTTGAGTGTC
GATGCGTTGG CACTGGCTGA GAAAAACCTC AAGGCCCTTG CCCCACAACA ATCTTGTCGG
CTGCACCATG GATCTTGGTG GCTTCCCCTG CAGGCCTTTT GGGGACAGCT TGAGATCGTG
GTGAGTAATC CTCCTTACAT CCCCAGCCCA TTGCTTGGGG AGTTGGATCC TGTGGTGCGG
GAGCATGAAC CGCATGTTGC GTTGCTTGCT GGGGAGGATG GTCTCGAGGC CATTCGCTCT
TTATTGATGG ATGCGCCGCG TGCTCTTGCC CCAGGTGGCG TTCTGTTCTT GGAACATCAC
CATGACCAAA GTGAGAACGT TCAAGATTTA ATGCGTGCAG CTGGGCTGGT GAACGTCTCT
TCTGCGAACG ATCTTGAGGG GATAGCCCGT TTCGCTCAGG GTCAGCGGGC TCTCACATCA
GCCCTATGA
 
Protein sequence
MAAALNVTTE QFLAGNDLLA WRRRQLRRGG RSVDLDWLLD LGGGVSWSEL QRLLIDSQGR 
IKIDQSLEEL EKLWLLHLER SMPLQYLVGV CPWRDLLIEV SSAALIPRQE TELLVDLALS
FAGGRPPRSW ADLGTGSGAI AVSLCRAWPE AEGHAVDLSV DALALAEKNL KALAPQQSCR
LHHGSWWLPL QAFWGQLEIV VSNPPYIPSP LLGELDPVVR EHEPHVALLA GEDGLEAIRS
LLMDAPRALA PGGVLFLEHH HDQSENVQDL MRAAGLVNVS SANDLEGIAR FAQGQRALTS
AL