Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9902_1850 |
Symbol | |
ID | 3742143 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9902 |
Kingdom | Bacteria |
Replicon accession | NC_007513 |
Strand | + |
Start bp | 1782226 |
End bp | 1783515 |
Gene Length | 1290 bp |
Protein Length | 429 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637772045 |
Product | peptidase S41A, C-terminal protease |
Protein accession | YP_377851 |
Protein GI | 78185416 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0793] Periplasmic protease |
TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.333848 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTATCCAA CTGTTAACAA CTTCTCGCAT CGTCTGCGGC GCAACACATC TCCCATGGCC AAAAAGCTCA TCACTCAACT GATTGCGGCC TGCATCGCGT TTGGACTGGT GTTCGTGCCT ATTTCGGGGG TCTACGCCCT CAGCGATACC CAGCAACTCG TCGTGGATAG CTGGCGCCTG GTGAACCAGG GCTACTGGAA CCCGGAACGA CTTGATGACG TGCGATGGCG ACGCCAACGT CAAAAAGCCC TCGAAAAAAC AATTCAGAGC AGCGACGACG CCTACAACGC CATAGAAGAG ATGCTCGGGG AACTCGGCGA CCCCTACACA CGACTCCTAC GGCCGAAGGA CTACGCAGCG ATCAAAAACA GCACCAGTGG AAATCTCAGT GGTGTGGGGC TGCAACTTGG TCCTGATGAC CAGCAAGACC AAGTAGTCGT GATTTCAGCT TTGGACGGAT CGCCCGCTGC GGACGCCGAA ATCGCTAGCG GGGCGTACCT CCTCGCTGTC GATGGGCAAC CCATCTCCGA TCTCGGCCTT GAAGGCGCCG CCAATGCGCT TCGCGGTGAA GTTGGCACCC AGGTGGTTCT GACATTGCAG CAAGGAAGCA ATAGTCCTGA AGAACTGTCC TTAGAACGCC GCAGCGTCGA CCTTCGTCCG GTGCGGACAC GGCGGTTGCG CACCGAATCC CACACCCTGG GTTATTTGCG TATTACCCAG TTCACAGAGG GGGTTCCCAT GCAAGTGCTG GAGGCACTCG CTGAACTCCA AGACAAAGGC ATCGAAGGAT TGGTGTTGGA CCTCCGCAAC AACTCTGGTG GGCTTGTGAG TTCTGGATTA GCCGTTGCGG ACGACTTCCT CAGCGGGGGA GCCATCGTTG AAACCCGCAA CCGAGAAGGC ATTACAGACA GCATTCAGGC CGGGACTTCA ACACTGTTTG ACGGACCCAT GCTCACCCTG GTGAATGGCG GCACGGCAAG CGCTAGCGAA ATCCTTGCGG GTGCCTTGCA GGACAGCGGC CGCTCAACCC TGCTGGGCAA TCGAACCTTC GGGAAAGGGC TCATTCAAAC CCTCACGAAC CTGAGTGATG GCAGTGGTCT TGCCGTCACC GTGGCGGGCT ATGTCACCCC CAGCGGACGG GATATTCAGG ATGCAGGGAT TGAACCCGAT CGCCTGCTTT CCGATCCCGA ACCTCTCAAC CCAGGAGGCG AAGGAGACCG CTGGCTGAAT GAAGCAGAGC AATGGATGGC GTCGTTGCTG GAGCTCGACA ACAGCACCTC CATCCCATGA
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Protein sequence | MYPTVNNFSH RLRRNTSPMA KKLITQLIAA CIAFGLVFVP ISGVYALSDT QQLVVDSWRL VNQGYWNPER LDDVRWRRQR QKALEKTIQS SDDAYNAIEE MLGELGDPYT RLLRPKDYAA IKNSTSGNLS GVGLQLGPDD QQDQVVVISA LDGSPAADAE IASGAYLLAV DGQPISDLGL EGAANALRGE VGTQVVLTLQ QGSNSPEELS LERRSVDLRP VRTRRLRTES HTLGYLRITQ FTEGVPMQVL EALAELQDKG IEGLVLDLRN NSGGLVSSGL AVADDFLSGG AIVETRNREG ITDSIQAGTS TLFDGPMLTL VNGGTASASE ILAGALQDSG RSTLLGNRTF GKGLIQTLTN LSDGSGLAVT VAGYVTPSGR DIQDAGIEPD RLLSDPEPLN PGGEGDRWLN EAEQWMASLL ELDNSTSIP
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