Gene Syncc9902_1850 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_1850 
Symbol 
ID3742143 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp1782226 
End bp1783515 
Gene Length1290 bp 
Protein Length429 aa 
Translation table11 
GC content58% 
IMG OID637772045 
Productpeptidase S41A, C-terminal protease 
Protein accessionYP_377851 
Protein GI78185416 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0793] Periplasmic protease 
TIGRFAM ID[TIGR00225] C-terminal peptidase (prc) 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.333848 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATCCAA CTGTTAACAA CTTCTCGCAT CGTCTGCGGC GCAACACATC TCCCATGGCC 
AAAAAGCTCA TCACTCAACT GATTGCGGCC TGCATCGCGT TTGGACTGGT GTTCGTGCCT
ATTTCGGGGG TCTACGCCCT CAGCGATACC CAGCAACTCG TCGTGGATAG CTGGCGCCTG
GTGAACCAGG GCTACTGGAA CCCGGAACGA CTTGATGACG TGCGATGGCG ACGCCAACGT
CAAAAAGCCC TCGAAAAAAC AATTCAGAGC AGCGACGACG CCTACAACGC CATAGAAGAG
ATGCTCGGGG AACTCGGCGA CCCCTACACA CGACTCCTAC GGCCGAAGGA CTACGCAGCG
ATCAAAAACA GCACCAGTGG AAATCTCAGT GGTGTGGGGC TGCAACTTGG TCCTGATGAC
CAGCAAGACC AAGTAGTCGT GATTTCAGCT TTGGACGGAT CGCCCGCTGC GGACGCCGAA
ATCGCTAGCG GGGCGTACCT CCTCGCTGTC GATGGGCAAC CCATCTCCGA TCTCGGCCTT
GAAGGCGCCG CCAATGCGCT TCGCGGTGAA GTTGGCACCC AGGTGGTTCT GACATTGCAG
CAAGGAAGCA ATAGTCCTGA AGAACTGTCC TTAGAACGCC GCAGCGTCGA CCTTCGTCCG
GTGCGGACAC GGCGGTTGCG CACCGAATCC CACACCCTGG GTTATTTGCG TATTACCCAG
TTCACAGAGG GGGTTCCCAT GCAAGTGCTG GAGGCACTCG CTGAACTCCA AGACAAAGGC
ATCGAAGGAT TGGTGTTGGA CCTCCGCAAC AACTCTGGTG GGCTTGTGAG TTCTGGATTA
GCCGTTGCGG ACGACTTCCT CAGCGGGGGA GCCATCGTTG AAACCCGCAA CCGAGAAGGC
ATTACAGACA GCATTCAGGC CGGGACTTCA ACACTGTTTG ACGGACCCAT GCTCACCCTG
GTGAATGGCG GCACGGCAAG CGCTAGCGAA ATCCTTGCGG GTGCCTTGCA GGACAGCGGC
CGCTCAACCC TGCTGGGCAA TCGAACCTTC GGGAAAGGGC TCATTCAAAC CCTCACGAAC
CTGAGTGATG GCAGTGGTCT TGCCGTCACC GTGGCGGGCT ATGTCACCCC CAGCGGACGG
GATATTCAGG ATGCAGGGAT TGAACCCGAT CGCCTGCTTT CCGATCCCGA ACCTCTCAAC
CCAGGAGGCG AAGGAGACCG CTGGCTGAAT GAAGCAGAGC AATGGATGGC GTCGTTGCTG
GAGCTCGACA ACAGCACCTC CATCCCATGA
 
Protein sequence
MYPTVNNFSH RLRRNTSPMA KKLITQLIAA CIAFGLVFVP ISGVYALSDT QQLVVDSWRL 
VNQGYWNPER LDDVRWRRQR QKALEKTIQS SDDAYNAIEE MLGELGDPYT RLLRPKDYAA
IKNSTSGNLS GVGLQLGPDD QQDQVVVISA LDGSPAADAE IASGAYLLAV DGQPISDLGL
EGAANALRGE VGTQVVLTLQ QGSNSPEELS LERRSVDLRP VRTRRLRTES HTLGYLRITQ
FTEGVPMQVL EALAELQDKG IEGLVLDLRN NSGGLVSSGL AVADDFLSGG AIVETRNREG
ITDSIQAGTS TLFDGPMLTL VNGGTASASE ILAGALQDSG RSTLLGNRTF GKGLIQTLTN
LSDGSGLAVT VAGYVTPSGR DIQDAGIEPD RLLSDPEPLN PGGEGDRWLN EAEQWMASLL
ELDNSTSIP