Gene Syncc9902_1839 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_1839 
Symbol 
ID3742132 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp1766210 
End bp1767154 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content57% 
IMG OID637772031 
Productpeptidoglycan-binding LysM 
Protein accessionYP_377840 
Protein GI78185405 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.955288 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCCGCT CTGGTTTCGC CGTCCTTGCC CTGACGGCTC TAATCCTTCC CCTCTCGGCA 
ACCGCCGCCA CCATCACGGT GCGACCTGGA GAAACGCTCA CAGACATTGC CTACCGATCA
GGCGTGAGCG TGGGCACTTT GATGCGGCTC AACAACATGA GCAATGCCAA CTACTTGGAA
GCGGGCAGCC AGCTTCAAGT TCCAGGGCCA AGGGTGAGCG CCGGTAACGG ACGACATCGG
GTAAAAGGGG GAGAAACCCT CAGCAGAATC GCAACCCAAT ACAAGGTGAG CAGCCGAGAT
CTGATGGCCG TCAATGGCCT CCGCAACGCC AACCACGTGG AAGTGGGCCA AACCCTGAAA
TTACCCAGCA ACGCTGTTCT GCCAAAACCT GGCTTCAAAC CCGTTGCCGT AACCCCTATC
CCTGGAGCCA CTGAACACAC CGTGGCTAAG GGGCAAACCC TCACCCAAAT TGCCAAGGCC
TACAAGCTGC CAATCTCCAC GCTGATCAGC ATCAACGACC TCACCAACCC CAACAAAGTG
GAGGTGGGCA CACGGCTCTA TCTCACGCAA CCCACCACCG TCTTGGCAAC CCAAAGCCAG
AGCAAACCGG CCGTAACCAA GCCCGTTCAA ACCAAAGTCA GCACAGCACA ACCTGCCAAG
AAGGTCGTGC CTGCCTCGAC AACGACCAAA ACGCAACTCG CAAAGTCGAC GGATTGGAGA
ACCTACGGTC CGCTGCAAGT GGACTGGGCC AATTGGCAAC CAATGGGGGG CAGTCAAGTG
GTCCCAACGC TGAATTCCCA AGGCCAAGGG TTGTACCTGG CGGTGAATTG CTCAGCCAAC
AAAATCAATG CAACGGGAGC TGATGGCAGC TGGAAACTCT GGGCCGCTCC CCAAAGCCGC
TTCGAGAAAG ACTTGGTTAA AGATCGCTGT CAGGCCAAGG CATAG
 
Protein sequence
MRRSGFAVLA LTALILPLSA TAATITVRPG ETLTDIAYRS GVSVGTLMRL NNMSNANYLE 
AGSQLQVPGP RVSAGNGRHR VKGGETLSRI ATQYKVSSRD LMAVNGLRNA NHVEVGQTLK
LPSNAVLPKP GFKPVAVTPI PGATEHTVAK GQTLTQIAKA YKLPISTLIS INDLTNPNKV
EVGTRLYLTQ PTTVLATQSQ SKPAVTKPVQ TKVSTAQPAK KVVPASTTTK TQLAKSTDWR
TYGPLQVDWA NWQPMGGSQV VPTLNSQGQG LYLAVNCSAN KINATGADGS WKLWAAPQSR
FEKDLVKDRC QAKA