Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9902_1839 |
Symbol | |
ID | 3742132 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9902 |
Kingdom | Bacteria |
Replicon accession | NC_007513 |
Strand | + |
Start bp | 1766210 |
End bp | 1767154 |
Gene Length | 945 bp |
Protein Length | 314 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637772031 |
Product | peptidoglycan-binding LysM |
Protein accession | YP_377840 |
Protein GI | 78185405 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.955288 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCCGCT CTGGTTTCGC CGTCCTTGCC CTGACGGCTC TAATCCTTCC CCTCTCGGCA ACCGCCGCCA CCATCACGGT GCGACCTGGA GAAACGCTCA CAGACATTGC CTACCGATCA GGCGTGAGCG TGGGCACTTT GATGCGGCTC AACAACATGA GCAATGCCAA CTACTTGGAA GCGGGCAGCC AGCTTCAAGT TCCAGGGCCA AGGGTGAGCG CCGGTAACGG ACGACATCGG GTAAAAGGGG GAGAAACCCT CAGCAGAATC GCAACCCAAT ACAAGGTGAG CAGCCGAGAT CTGATGGCCG TCAATGGCCT CCGCAACGCC AACCACGTGG AAGTGGGCCA AACCCTGAAA TTACCCAGCA ACGCTGTTCT GCCAAAACCT GGCTTCAAAC CCGTTGCCGT AACCCCTATC CCTGGAGCCA CTGAACACAC CGTGGCTAAG GGGCAAACCC TCACCCAAAT TGCCAAGGCC TACAAGCTGC CAATCTCCAC GCTGATCAGC ATCAACGACC TCACCAACCC CAACAAAGTG GAGGTGGGCA CACGGCTCTA TCTCACGCAA CCCACCACCG TCTTGGCAAC CCAAAGCCAG AGCAAACCGG CCGTAACCAA GCCCGTTCAA ACCAAAGTCA GCACAGCACA ACCTGCCAAG AAGGTCGTGC CTGCCTCGAC AACGACCAAA ACGCAACTCG CAAAGTCGAC GGATTGGAGA ACCTACGGTC CGCTGCAAGT GGACTGGGCC AATTGGCAAC CAATGGGGGG CAGTCAAGTG GTCCCAACGC TGAATTCCCA AGGCCAAGGG TTGTACCTGG CGGTGAATTG CTCAGCCAAC AAAATCAATG CAACGGGAGC TGATGGCAGC TGGAAACTCT GGGCCGCTCC CCAAAGCCGC TTCGAGAAAG ACTTGGTTAA AGATCGCTGT CAGGCCAAGG CATAG
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Protein sequence | MRRSGFAVLA LTALILPLSA TAATITVRPG ETLTDIAYRS GVSVGTLMRL NNMSNANYLE AGSQLQVPGP RVSAGNGRHR VKGGETLSRI ATQYKVSSRD LMAVNGLRNA NHVEVGQTLK LPSNAVLPKP GFKPVAVTPI PGATEHTVAK GQTLTQIAKA YKLPISTLIS INDLTNPNKV EVGTRLYLTQ PTTVLATQSQ SKPAVTKPVQ TKVSTAQPAK KVVPASTTTK TQLAKSTDWR TYGPLQVDWA NWQPMGGSQV VPTLNSQGQG LYLAVNCSAN KINATGADGS WKLWAAPQSR FEKDLVKDRC QAKA
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