Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9902_1822 |
Symbol | |
ID | 3742919 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9902 |
Kingdom | Bacteria |
Replicon accession | NC_007513 |
Strand | + |
Start bp | 1745134 |
End bp | 1747029 |
Gene Length | 1896 bp |
Protein Length | 631 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637772014 |
Product | ATPase |
Protein accession | YP_377823 |
Protein GI | 78185388 |
COG category | [R] General function prediction only |
COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGAGTTTGA TCAGCTTGGT GGGTGCTTCG AAAGACTTCG GCATCCGAAC TCTGTTTGCC GATCTGAATC TCCATATCGG CGACAAAGAG CGCCTTGGGT TGATCGGTCC GAACGGCGCC GGGAAATCCA CCTTGCTCAA GGTTCTCGCC GGAAGCGAAC CACTGGGGAA CGGTGAACGC CGCTGCTCAC CACGTTTACG GGTTGAACTT GTTGGCCAGG ACAGTCGAAT CACCCCCGGG CTCACCGTTC TCGAACAAGT TTTGGAAGGG TGCGGCGCCA AACGCGATCT GCTGTTGCGC TTCAACGCTC TCAGCGATGC GGTCGCCGCG GCACCGGAGA ACACAACGTT GTTGTCAGAG CTGGGAGAGC TCAGCCAAAC AATGGATGAG GAGGAGGCCT GGAGCCTCGA GCAGCAATGC CGCGAAGTCC TTCAGAAACT TGGAATTGGC GACTTGCAAC GTCCCGTTGA GGACCTGTCT GGCGGCTATC GCAAACGGGT TGGCCTGGCC TCTGCCCTGG TGGCTTGTCC AGATGTGTTG CTTTTGGATG AACCCACAAA CCATCTCGAT GCTGCTGCCA TTGAGTGGCT TCAAAGCTGG TTGGATCGCT ACCCAGGGGC CCTTGTTTTG GTCACCCATG ACCGGTACGT CCTCGATCGC GTCACCCGTC GAATGGTGGA AGTAGATCAG GGGCGAGCGA GAACGTATCA GGGCAACTAC AGCACTTTTT TGCAGCACAA AGCCGAAGAA GAGGCTTCGG AAGCAGCCTC AGCTGCCAAG TTTCGTGGCG TTCTTCGACG CGAACTGGCT TGGCTTCGTC AGGGGCCCAA AGCTCGCAGC ACCAAGCAGC GAGCACGGCT TCAACGCATT GAGGCGATGC GCGAAGACAA ACCAAGCCAA GCCAAGGGCA AGCTCGAAAT GGCGAGCGTG AGCCGCCGCA TTGGCAAACA AGTCATCGAA GCTGAAGCCC TCGGCGTAAC GGCGAATGGA CAACCTGATG GTCAACGCCT ACTCGACGAC TTCAGCTACA GCTTCAGTCC TGAAGACCGG GTGGGAATTT TGGGACCCAA TGGCAGCGGC AAGTCCACCC TGCTGGACTT GATTGCAGGA CGGCGTCAGG CCACAGAAGG AACCTTGCGG CTTGGCGACA CCATCCATAT CGGTTATTTG GATCAACACA CCGATGCCTT TGACCAAGGG AAAGGTCTGG ATAGAAAAGT GATCGAATTT GTCGAAGAAG CCGCCAGCCG GATCGATTTA GGCGGAGAAC AGGTCACTGC CTCGCAACTT CTCGAGCGCT TCCTTTTCCC TCCCGCACAA CAACACAGCC CACTGAGCAA GCTTTCGGGA GGAGAGCGGC GGCGACTCAC CTTGTGCCGA ATGTTGGTTC AAGCTCCCAA CGTGCTGCTG CTTGATGAGC CCACCAATGA CCTTGACGTG CAAACACTCA GCGTTCTGGA GGACTTTTTG GAAGACTTCC GAGGCTGCGT CATCGTCGTT TCCCACGATC GCTACTTTCT GGATCGAACG GTGGATCGCC TGTTTTGCTT CGACAACGGC CGACTCAAAC GTTTTGAGGG GAATTACAGC GAATTCCTTG AGCAGGAGAA ACAATTCGAG CGGACGCAAA CCATCGCGCC AACGCCCACC AAAAAACGTC AACCCAACAA GCCCATATCG GAGGAGCTAC GCCGTCGCAG CTTCAAGGAA ACGAAGGAGC TCGAAAAGCT CGATTCAACA TTGCCGCAAC TTGAAAAGCA GCGGTCTGCT TTAGAGGCAC AAATCTCAGG CCACTGTGAC GACATGACCG CTCGAAGCCT CGAACTTGCA GACCTGATCA GCACCATCGA ACAAGCGGAA GAACGCTGGC TCGAGCTGAG CGAGCTTGCT CCTTAA
|
Protein sequence | MSLISLVGAS KDFGIRTLFA DLNLHIGDKE RLGLIGPNGA GKSTLLKVLA GSEPLGNGER RCSPRLRVEL VGQDSRITPG LTVLEQVLEG CGAKRDLLLR FNALSDAVAA APENTTLLSE LGELSQTMDE EEAWSLEQQC REVLQKLGIG DLQRPVEDLS GGYRKRVGLA SALVACPDVL LLDEPTNHLD AAAIEWLQSW LDRYPGALVL VTHDRYVLDR VTRRMVEVDQ GRARTYQGNY STFLQHKAEE EASEAASAAK FRGVLRRELA WLRQGPKARS TKQRARLQRI EAMREDKPSQ AKGKLEMASV SRRIGKQVIE AEALGVTANG QPDGQRLLDD FSYSFSPEDR VGILGPNGSG KSTLLDLIAG RRQATEGTLR LGDTIHIGYL DQHTDAFDQG KGLDRKVIEF VEEAASRIDL GGEQVTASQL LERFLFPPAQ QHSPLSKLSG GERRRLTLCR MLVQAPNVLL LDEPTNDLDV QTLSVLEDFL EDFRGCVIVV SHDRYFLDRT VDRLFCFDNG RLKRFEGNYS EFLEQEKQFE RTQTIAPTPT KKRQPNKPIS EELRRRSFKE TKELEKLDST LPQLEKQRSA LEAQISGHCD DMTARSLELA DLISTIEQAE ERWLELSELA P
|
| |