Gene Syncc9902_1815 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_1815 
Symbol 
ID3742265 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand+ 
Start bp1738664 
End bp1739680 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content47% 
IMG OID637772007 
Productglyceraldehyde-3-phosphate dehydrogenase, type I 
Protein accessionYP_377816 
Protein GI78185381 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase 
TIGRFAM ID[TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAACCC GCATTGGCAT CAATGGGTTT GGACGCATCG GTCGATTGGC ATTTCGACAA 
GCAGTGTCGT TGCCGGATAT TGAGGTGGTG GCTGTCAACG ATCTGCTCGA TATCGACTAC 
ATGGCTTATT TATTGCGTTA TGACTCAACA CATCGGCGTT TTCCTGGAAG CGTTGAGGTA 
GAAAATGGAA ACTTAATTGT TAATGGAAAA AAAATCCGTA TCAGTGCTCA ACGAGATCCA 
AAAGACCTCG CTTGGGGAGA CGTAGGCGCT GATTACATCC TCGAAAGTAC AGGATTTTTT 
CTGACAGACG AAACAGCACG GTGCCACATC GAAGCAGGCG CCAAACGCGT TGTAATGAGT 
GCCCCATCAA AGGATGAAAC ACCGATGTTC GTCATGGGCG TTAATCATAA AAGCTACAAC 
GATCAAGATA TTGTTTCGAA TGCAAGTTGC ACCACAAACT GTTTAGCACC AATTGCAAAA 
GTTGTTCACG ACAGGTTTGG GATTCTGAGT GGATTAATGA CCACTGTTCA TGCAACAACA 
GCAACCCAAA AGCCAGTTGA TAGTCCTTCG CTTCGGGATT GGCGAGGCGG CCGAGGTGCA 
GGCCAAAGCA TTATTCCCAG CTCTACTGGT GCCGCCAAAG CTGTTGGAAA GGTCATCCCT 
GAGCTCAACG GAAAACTAAC TGGCATGGCA TTCCGCGTCC CAACGCCTGA TGTTTCCGTC 
GTTGATCTGA CGGTCAACCT GGCTCAGTCG ACGACCTATG AGGCAGTAAA AAATGCGATG 
AAAGAAGCTT CTGAGAATGA ATTATCAGGC ATTCTTGGCT ACACAGAAGA TCAAATTGTT 
TCGAACGATT TGCTTGGGGA AAGCTGTACC TCGGTGTTTG ATGCTGGGGC AGGAATGGCA 
TTAAACGACA CTTTCATGAA GCTAGTTGCT TGGTACGACA ACGAATGGGC ATACAGCTGT 
AAGTGCATTG ATTTAATTCA GCATATGGAT TCTTCTGGCG AAAAGAAAGA TTCCTAA
 
Protein sequence
MTTRIGINGF GRIGRLAFRQ AVSLPDIEVV AVNDLLDIDY MAYLLRYDST HRRFPGSVEV 
ENGNLIVNGK KIRISAQRDP KDLAWGDVGA DYILESTGFF LTDETARCHI EAGAKRVVMS 
APSKDETPMF VMGVNHKSYN DQDIVSNASC TTNCLAPIAK VVHDRFGILS GLMTTVHATT 
ATQKPVDSPS LRDWRGGRGA GQSIIPSSTG AAKAVGKVIP ELNGKLTGMA FRVPTPDVSV 
VDLTVNLAQS TTYEAVKNAM KEASENELSG ILGYTEDQIV SNDLLGESCT SVFDAGAGMA 
LNDTFMKLVA WYDNEWAYSC KCIDLIQHMD SSGEKKDS