Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9902_1747 |
Symbol | groEL |
ID | 3742157 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9902 |
Kingdom | Bacteria |
Replicon accession | NC_007513 |
Strand | + |
Start bp | 1679160 |
End bp | 1680848 |
Gene Length | 1689 bp |
Protein Length | 562 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637771938 |
Product | chaperonin GroEL |
Protein accession | YP_377748 |
Protein GI | 78185313 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0459] Chaperonin GroEL (HSP60 family) |
TIGRFAM ID | [TIGR02348] chaperonin GroL |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCAAAC TTCTTTCTTT CTCCGACGAA TCACGCAGTT CCCTTGAGCG TGGTGTGAAC GCCCTTGCCA ATGCTGTCCG AGTCACCATC GGACCCAAGG GTCGGAATGT CGTTCTCGAG AAGAAATTTG GCGCCCCAGA CATCGTTAAT GACGGCGATA CCATTGCCCG CGATATCGAG CTGGAAGATC CTTTTGAAAA TCTCGGCGCC AAGCTGATTC AACAGGTGGC ATCCAGAACT AAAGACAAAG CTGGAGACGG CACCACCACG GCCACGGTTT TAGCTCAGGC CATGGTTCGC GAAGGACTCC GCAACACAGC AGCAGGAGCT AGCCCTGTAG AGCTTCGTCG TGGGATGGAG AAAGCGGCAG CACAGGTGGT TGCCGGTTTG GCGAGCCGAA GTCAGGCCGT CGAAGGTGAT TCCATCCAAC AGGTGGCCAC GGTGAGTTCC AGTGGCGATG AAGAAGTGGG TCGGATGATC GCTGAAGCGA TGGATCGGGT CAGCGTGGAC GGCGTCATCA CCGTTGAAGA ATCCAAATCG CTCGCCACCG AAATGGAGGT GACTGAAGGC ATGGCATTCG ATCGCGGATA CAGCTCGCCC TATTTCGTCA CGGATGCTGA TCGTCAGGTT TGTGAATTCG AAAATCCATT GATCCTGCTG ACCGATCGAA AGATCAGCAC CGTCATCGAT TTAGTGCCCG TTCTTGAAGC GGTTCAAAAA AGTGGCTCGC CGCTTTTAAT CCTCTCGGAA GAGGTGGAGG GGGAAGCCCT GGCCACCTTG GTGATGAACA AGAGCCGTGG CGTCCTCCAA GTGGCAGCAG TGCGTGCTCC TTCCTTCGGA GACCGTCGCA AAGCAGCCTT GGCTGATATC GCCATCCTCA CGGGGGGCAC CTTAATCAGC GAAGACCAAG CGATGACTCT CGACAAGGTG ACGCTCGAGG ATCTCGGTCA CGCCCGTCGG GTGACGATCA GCAAAGAGAG CACCACCATC GTTGCGAATG ACAATCACAG TGAAGCGGTG AGCAATCGTG TTGCCGCAAT CAAGCGAGAG CTCGACGCGA CAGAGTCGGA TTACGACCGC GAAAAGCTGA ATGAGCGGAT TGCCAAACTG GCCGGTGGTG TTGCCGTCAT CAAGGTGGGT GCTGCAACAG AAACCGAACT GAAAAACCGC AAACTGCGAA TTGAAGACGC CCTGAATGCC ACCCGTGCCG CTGTGGAAGA AGGAATCGTG GCTGGAGGCG GAAGCACGTT GCTTCAGCTC GCTGAAGACC TCAACGCCCT AGCGGCACAA CTGGACGGCG ATCAACGCAC CGGCGTAGAA ATTGTGCAGC GATCACTCAC CGCACCCGTC CACCAGATCG CAACCAATGC AGGACATAAC GGTGACGTGG TGATCGAAAC GATGCGCCAA AGCGGTCAGG GATTCAATGC CCTAACGGGT GTGTACGAAG ACTTGATGGC GACAGGCATC GTTGATGCCA CCAAAGTTGT TCGACTTGCA GTACAGGACG CGGTGTCGAT TGCATCCCTG CTGGTCACAA CTGAGGTAGT GATTGCTGAC AAACCAGAAC CAGAACCTCC TGCTGGAGCT GGAGGTGAAG ATCCCATGGG TGGAATGGGC GGCATGGGTG GCATGGGCGG TATGGGTATG CCTGGCATGG GCGGCATGGG CATGCCTGGA ATGATGTGA
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Protein sequence | MAKLLSFSDE SRSSLERGVN ALANAVRVTI GPKGRNVVLE KKFGAPDIVN DGDTIARDIE LEDPFENLGA KLIQQVASRT KDKAGDGTTT ATVLAQAMVR EGLRNTAAGA SPVELRRGME KAAAQVVAGL ASRSQAVEGD SIQQVATVSS SGDEEVGRMI AEAMDRVSVD GVITVEESKS LATEMEVTEG MAFDRGYSSP YFVTDADRQV CEFENPLILL TDRKISTVID LVPVLEAVQK SGSPLLILSE EVEGEALATL VMNKSRGVLQ VAAVRAPSFG DRRKAALADI AILTGGTLIS EDQAMTLDKV TLEDLGHARR VTISKESTTI VANDNHSEAV SNRVAAIKRE LDATESDYDR EKLNERIAKL AGGVAVIKVG AATETELKNR KLRIEDALNA TRAAVEEGIV AGGGSTLLQL AEDLNALAAQ LDGDQRTGVE IVQRSLTAPV HQIATNAGHN GDVVIETMRQ SGQGFNALTG VYEDLMATGI VDATKVVRLA VQDAVSIASL LVTTEVVIAD KPEPEPPAGA GGEDPMGGMG GMGGMGGMGM PGMGGMGMPG MM
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