| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_1742 |
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| Symbol | ispD |
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| ID | 3742152 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9902 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007513 |
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| Strand | - |
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| Start bp | 1675384 |
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| End bp | 1676064 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637771933 |
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| Product | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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| Protein accession | YP_377743 |
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| Protein GI | 78185308 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
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| TIGRFAM ID | [TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGCATCTGT TAATTGCTGC GGCGGGGAGT GGTCGCCGCA TGGGTGCGGA TCGAAACAAG
CTGCTGTTGC CTCTTTTGGG GCGGCCTTTG ATCGCTTGGA CAGTGGATGC AGCGTTGACG
GCCACTGAAA TTAGTTGGAT TGGAATCGTT GGCCAGGACA TCGATCGAGC CGAGATCCTG
GATGCTCTTG GCTCAGTGAA GAAACCTTTG GTTTGGATTC AAGGGGGGGC GACCCGCCAG
GAATCCGTGC TGCGGGGTCT GGCCGGACTG CCAGAGGGGG CACGCCATGT GCTGATTCAT
GACGGTGCCA GGTGTTTGGT TCAACCAGAC CTTTTTGATC GGTGTGCCGT GGCTGTGGAG
GCTGGGGCGG CATTGATTGC TGCAACCCCA GTGACCGACA CCATTAAGCG GGTGGATGAA
CACGGCATGA TCCGTGACAC GCCTGATCGT GCTGAGCTTT GGGCTGCACA AACTCCGCAA
GGGTTTGAGG TGGAGCAGCT TCGTCAGGGT CATGTGAGAG CTCAAGCGGA GGGGTGGAGC
GTGACGGACG ATGCATCGCT CTTTGAGCGT TTGGGCTGGT CGGTGCAGGT GCTGGATGCT
GGCCCTTCGA ACATCAAGGT GACCACCCCC TTTGATCTCA CGGTGGCTGA AGCAGTTCTC
AGTTCAAGGA CGACACCCTG A
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| Protein sequence | MHLLIAAAGS GRRMGADRNK LLLPLLGRPL IAWTVDAALT ATEISWIGIV GQDIDRAEIL
DALGSVKKPL VWIQGGATRQ ESVLRGLAGL PEGARHVLIH DGARCLVQPD LFDRCAVAVE
AGAALIAATP VTDTIKRVDE HGMIRDTPDR AELWAAQTPQ GFEVEQLRQG HVRAQAEGWS
VTDDASLFER LGWSVQVLDA GPSNIKVTTP FDLTVAEAVL SSRTTP
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