Gene Syncc9902_1716 details

Gene Information

• Locus tag: Syncc9902_1716
• Symbol: rplS
• ID: 3742206
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Synechococcus sp. CC9902
• Kingdom: Bacteria
• Replicon accession: NC_007513
• Strand: +
• Start bp: 1655035
• End bp: 1655487
• Gene Length: 453 bp
• Protein Length: 150 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 637771908
• Product: 50S ribosomal protein L19
• Protein accession: YP_377718
• Protein GI: 78185283
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0335] Ribosomal protein L19
• TIGRFAM ID: [TIGR01024] ribosomal protein L19, bacterial type

Plasmid Coverage information

• Num covering plasmid clones: 25
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCGGCCG ACCAGAAGGA CACCACGGTG ACCGAAGAGA GCACTCAACA AGAAACCGTG 
GCGACCAAGG CAAAGCCTGC GGCAGCTTCG AAGAAGCTTT GTGCTGAAGA GCTCATACGC 
GAGTTTGAGA GCGCTCAGCA GAAAACTGAT CTCCCAGAGA TTTATGTCGG AGACACAGTT 
CGTGTCGGCG TCAGGATCAG TGAAGGGAAC CGGGAGCGCG TCCAGCCCTA CGAAGGGGTC 
GTGATTTCCA AACGCCACGG TGGAATGAAT CAAACGATCA CCGTTCGTCG CATTTTCCAA 
GGCATCGGCG TTGAACGGGT GTTTATGGTC CACAGCCCGC AAGTTGCCAA CATCAAGGTT 
GAACGGCGCG GTAAAGTACG AAGGGCGAAG CTTTTTTATC TGCGGGAACG GGTGGGCAAG 
GCCACCCGCG TGAAGCAGCG CTTCGATCGC TGA 

 

Protein sequence

MAADQKDTTV TEESTQQETV ATKAKPAAAS KKLCAEELIR EFESAQQKTD LPEIYVGDTV 
RVGVRISEGN RERVQPYEGV VISKRHGGMN QTITVRRIFQ GIGVERVFMV HSPQVANIKV 
ERRGKVRRAK LFYLRERVGK ATRVKQRFDR