Gene Syncc9902_1708 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_1708 
Symbol 
ID3742198 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp1650014 
End bp1650511 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content47% 
IMG OID637771900 
Productputative nucleotide-binding protein 
Protein accessionYP_377710 
Protein GI78185275 
COG category[S] Function unknown 
COG ID[COG1666] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCAGTA CTTCCTCTTT CGATGTCGTT TCTGATTTCG ACCGACAGGA GCTGGTGAAC 
ACCCTTGATC AGGTGCGTCG GGACGTTTCT ACCCGCTACG ACTTGAAGGA TTCCAAAACC
GAGATTGTGC TGGAGGAAAC CGAGATGGTG ATTACGACAG CCAGTGACAT GACGCTCCAG
GCCGTTGAAG ATGTGTTGCG CGCGAAAGCG ACGAAACGGA ATCTTTCGTT GAAAATTTTT
GATTTTCAGA CACCGGAGTC GGTTGGAGGA AACCGCATTC AGCAGGTGGT GAAGCTGCGG
AAGGGACTGA GCCAAGAAAT CGCTAAGAAA TTAAGTAAAA TCGTGAGAGA TGAACTCAAA
AAAGTAACTG TTGCGATTCA GGGTGAGAGT GTTCGAATCA CAGGGAAAAG TAAGGATGAT
CTTCAGGCAG CAATTCAATT AGTGAAGAGC AAAGAAGATG AATTGGATGT GCCGTTGCAG
TTTGAAAATT ATCGCTAA
 
Protein sequence
MASTSSFDVV SDFDRQELVN TLDQVRRDVS TRYDLKDSKT EIVLEETEMV ITTASDMTLQ 
AVEDVLRAKA TKRNLSLKIF DFQTPESVGG NRIQQVVKLR KGLSQEIAKK LSKIVRDELK
KVTVAIQGES VRITGKSKDD LQAAIQLVKS KEDELDVPLQ FENYR