Gene Syncc9902_1702 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_1702 
Symbol 
ID3742192 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp1646180 
End bp1646692 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content46% 
IMG OID637771894 
Producthypothetical protein 
Protein accessionYP_377704 
Protein GI78185269 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00590571 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCAGGCAT CAATTCCACC AGTTCCTCCC GCTTTGATCT GCACGATCCA AGCGGTTCAA 
AGCAGCTGGC TAAAAACGCC CATTCAGGCC GTTCGCCAGC TTGAATATCA AAGCTTCCGC
GTGATTCATG CTCCGGATTC AACTGAGAAA CAAAACGCGG AGCGAAAAGT AAAAGTAGAA
CCAAGGACAG TGATTGATAG CCGGCTCACA ATCCTGGCTG AAAACTTTCA ATCATTAGAA
CGCTGGCAAC CGAGAGCCAT GGGATATGGA CAGCTCAATT ACACGTGGTC ATTCAAGGCT
CCATTGGGCT TCGTGGCAAA ACCACATCCC GGCAAAACTT CAAACACAAT GAATACAACA
ACCATTCACG TTGAAGGCAG TTTAAAAATC AACCCACAAC TGCAATTTGA ATTGCACAAT
CTATCAACAT TGAGACAGGA CACATCAAGC GATTTGATCA ACAGATTGGA TGAACAAGCC
AAGGGAAGCT GCATTCCTCA ATCACGATCT TAA
 
Protein sequence
MQASIPPVPP ALICTIQAVQ SSWLKTPIQA VRQLEYQSFR VIHAPDSTEK QNAERKVKVE 
PRTVIDSRLT ILAENFQSLE RWQPRAMGYG QLNYTWSFKA PLGFVAKPHP GKTSNTMNTT
TIHVEGSLKI NPQLQFELHN LSTLRQDTSS DLINRLDEQA KGSCIPQSRS