| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_1677 |
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| Symbol | |
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| ID | 3743916 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9902 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007513 |
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| Strand | - |
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| Start bp | 1622086 |
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| End bp | 1624353 |
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| Gene Length | 2268 bp |
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| Protein Length | 755 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637771869 |
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| Product | primosomal protein n |
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| Protein accession | YP_377679 |
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| Protein GI | 78185244 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1198] Primosomal protein N' (replication factor Y) - superfamily II helicase |
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| TIGRFAM ID | [TIGR00595] primosomal protein N' |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCAACC TCAATATTTT AATGAAGTCT TTCGAAGTTT GCAAGTTGCC TTTGCAACCC
CAGAGGCTGG TTGACGTTTG GTTGGAGGCT GGTCGAGAAG GGCGTTCGTT TAGCTATCTC
GCGAGCACAG AGCTAGGGCT TCAATCCGGT GATCTTGTTC GCGTCCGCCT GCGTGGGCGG
TCGATGAATG GATTGGTCGT CTCCGAGCGT GCGTTGGACT CCTCTTCCAT CGAGGGTTTG
CAGCCCGTGG AAGCCTTGCT TCAAAAGGCT GCGGTTGACC CCTCTTGGAG TCGCTGGCTG
GAGCAGGTGG CGTTGCGGTG TCATCTCAGT TCCTTTCGCA TGCTGAAAGC GGCTCTCCCG
TCTGGGTGGC TAGGGCAAGC GCGCAGTGTT GGACTCGCAG GGGCTCGACA GTTGTGGTGG
GTGCAGTGTC TTGAGTCGAC CGATGTTGAA CATCAGCCCA CGCCCCGGCA GCAAGAGCTT
TTGGATTGGT TGTCTGAGGG TGGTGGAGGT GCTTGGCAGA AAGATCTTGA AGCTGCTGGA
TTCGGGGCTG GGTTGCTCCG CCCTCTCGAG CGGAACGGTC GGGTTGAGCG GACGCAGCGA
CGTTGGAATG GTGAAGTAGC GCGAAGCTCG GATCCGCTGG AGCTGCCGCA ATCCCTCAAG
CCGGAGCAGG CAGACGCGAT TGAGGTTTAT CAGGCTTTGC CAAAGGGGGC TGGCTTATTG
CTTTGGGGTG TAACGGGCTC AGGCAAAACC GAGGTCTATC TGCAGCTGGC TGCCGATGAA
CTGGCCAAGG GCAGGCACGT ATTGCTGCTC ACCCCCGAGA TTGGCCTCAT CCCCCAATTG
GTCGACCGTT GCCGCCGTCG GTTTGGGTCC AGGGTTGTGG AATATCACAG CGGATGTCGT
GACAGTGAAA AGGTGCGCGG GTGGCGCCGT TGTCTGGATC CGGATCAACC CCTCGTCGTG
GTGGGGACCC GTTCTGCCAT CTTCATGCCA CTAGCCCCCC TCGGGCTCGT GGTCCTCGAT
GAAGAGCACG ACAGTTCCTA CAAGCAGGAA TCACCGATGC CCTGTTATCA CGCCCGTGAC
TTGGCCATGG ACCGGGTTGT TCGGCATGGC GCACGGTTGG TGTTGGGGAG TGCAACCCCT
TCTGTCGAGA GTTGGTTGAG CTGTCAGCCC GGCGGGCCCT TACGCCTCGC GCGACTCAAG
GAACGAATTT CAAAGCAGGA TCTACCCCCG GTGCATGTGG TCGATATGCG CCATGAACTG
GCCGATGGTC ATAAGCGATT GGTGAGTCGC CCTTTGATGG AGCGTCTGGC GGCGCTTCCT
GAGCAGGGTG AGCAGGCCGT GGTGCTCGTT CCGCGACGGG GCTACAGCCC GTTCCTTGGC
TGTCGCAGTT GTGGAGAAGT GGTTCAGTGT CCCCACTGCG ACGTGGCCTT AACGGTCCAC
CGAGGTCAGG GGGGAAAGCA GTGGCTGCGA TGCCATTGGT GTGATCACCG TGAATCGATG
GAGACCCGTT GCAGCCACTG CGGATCAACA GCATTCAAGC CGTTCGGTGC TGGGACGCAG
CGGGTGTTGG AGCTCCTTGC TGAAGAGCTT GAAGGCCTGC GATTACTGAG GTTCGATCGT
GATTCCACCG GTGGGCGCGA TGGACATCGC CGCTTGTTGG ATCGTTTTGC GTCTGGCGAG
GCGGATGTGC TGATTGGAAC GCAGATGCTC GCCAAGGGTA TGGACTTGCC TCGGGTCACC
TTGGCGGCCG TTTTGGCTGC CGATGGACTG CTGCATCGTC CCGATCTTCG TGCTGGAGAA
CAGGCCCTTC AACTGCTTCT TCAGTTAGCA GGCCGTGCCG GCCGAGGGGA GAAGCCAGGG
CAGGTGTTGG TGCAGACCTA CTCCCCGGAG CATCCGGTGA TTCAACACCT GGTGGATGGC
CGATATGAAC TGTTTTTGGC TCAAGAGATT GAGCTGCGCC GCGAGGCGGG CCTGGTCCCC
TTTAGTCGCG CTTGTCTGTT GCGCTTGTCT GGAGAATCAG CCAGTGCGAC AGCCACAGCT
GCATCGGTTC TTGCGGAACG GCTGAAGCCC CTCTGTCAAA AGCAAAATTG GTGGTTGTTG
GGGCCTGCGC CTGCACCGGT CGCGCGAGTC GCTGGTCGAA GCCGTTGGCA ACTTCTTTTG
CATGGTCCGG TGGGCTCTGC CCTACCTCTC CCGCCGGGTC AGGCTCTTTG GGAGGCATTG
CCCCGCGGCG TTGCACTCTC TGTCGACCCG GATCCACAGC AGCTTTGA
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| Protein sequence | MANLNILMKS FEVCKLPLQP QRLVDVWLEA GREGRSFSYL ASTELGLQSG DLVRVRLRGR
SMNGLVVSER ALDSSSIEGL QPVEALLQKA AVDPSWSRWL EQVALRCHLS SFRMLKAALP
SGWLGQARSV GLAGARQLWW VQCLESTDVE HQPTPRQQEL LDWLSEGGGG AWQKDLEAAG
FGAGLLRPLE RNGRVERTQR RWNGEVARSS DPLELPQSLK PEQADAIEVY QALPKGAGLL
LWGVTGSGKT EVYLQLAADE LAKGRHVLLL TPEIGLIPQL VDRCRRRFGS RVVEYHSGCR
DSEKVRGWRR CLDPDQPLVV VGTRSAIFMP LAPLGLVVLD EEHDSSYKQE SPMPCYHARD
LAMDRVVRHG ARLVLGSATP SVESWLSCQP GGPLRLARLK ERISKQDLPP VHVVDMRHEL
ADGHKRLVSR PLMERLAALP EQGEQAVVLV PRRGYSPFLG CRSCGEVVQC PHCDVALTVH
RGQGGKQWLR CHWCDHRESM ETRCSHCGST AFKPFGAGTQ RVLELLAEEL EGLRLLRFDR
DSTGGRDGHR RLLDRFASGE ADVLIGTQML AKGMDLPRVT LAAVLAADGL LHRPDLRAGE
QALQLLLQLA GRAGRGEKPG QVLVQTYSPE HPVIQHLVDG RYELFLAQEI ELRREAGLVP
FSRACLLRLS GESASATATA ASVLAERLKP LCQKQNWWLL GPAPAPVARV AGRSRWQLLL
HGPVGSALPL PPGQALWEAL PRGVALSVDP DPQQL
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