Gene Syncc9902_1637 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_1637 
Symbol 
ID3743954 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp1583725 
End bp1584963 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content58% 
IMG OID637771828 
ProductRNA binding S1 
Protein accessionYP_377639 
Protein GI78185204 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0539] Ribosomal protein S1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.397933 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGCAG CCGGCAGTCC TCAGCCCAAC CGCCCCAAGG CGCCGCAACA GGCTGCGAAC 
AAGCCTCTGC AGGTGATGAA GATCAACCGC AAAGACGAGC AAGAGAAGCT GCAACGGGAG
GCAGCTGAAG CCCGCGCAGC CGCTGAAGCC GCCGCCGAAA AAGCAAGAAT GCTGGAGGAG
CGTGCCGGAC TCGCCGCACC GCCACGGTCC CGTCAAGCCG AAGCCTCCAG CCAGAGCGAT
GAGGAGAGGT TTGACATGGG TGCCATGGAG GGCATGTCCA TGGCAGATCT GATGGGCTCA
CCCGACGACA AACCCAAACG AGAGCAGCGC AGCGAACCCC GCAGCGTGGA CGACTTCGAT
TTCGACGAAG AAGCTTTTCT CGCCGCTTTG GATGAAAACG CCCCTGTCGG TACGACGGGC
GAGGTAATTA AGGGCACCGT GATTGCCCTC GAAAGCGACG GTGTGTATGT GGATATTGGG
GGCAAAGCCC CCGGTTTCAT GCCAAAAAGC GAAGCCGGCC TTGGTGTGAT CACCAACTAC
CAGGAGCGCT TCCCCAAGGG CCTCGAAGTG GAAGTTCTCG TTACTCGGGA ACAAAACGCC
GATGGCATGG TCACGATCAG CTGTCGTGCA CTGGAGTTGC GCAAGAGCTG GGACAAGGTG
AAAGTTCTTG AGAAAGAAGG AAAGGTGGTG CAAGTGATCG TGAGCGGCTT CAACCGGGGT
GGCGTCACTT GCGATTTGGA AGGTTTACGC GGCTTCATTC CCCGCTCCCA ACTCCAAGAT
GGCGAAAACC ATCAGGAGCT AGTTGGCAAA ACCCTTGGCG TGGCCTTTCT TGAGGTGAAT
TCAGGCACCC GGAAGCTTGT GCTGTCCGAA AAACGTGCTG CCACGGCTGC TCGTTTCCAA
GAGCTTGAGG TGGGCCAGTT GGTTGAAGGT CTTGTCGCCT CCGTGAAGCC CTACGGCCTG
TTTATCGACC TCGGCGGCAT CAGTGGATTG CTACATCAAT CATCGATCAC GAATGGAAGT
CTGCGCTCCA TTCGTGAGGT CTTCGACCAA GGCGATCGCG TTTCGGCTCT GATCACCGAT
TTAGATCCAG GTCGAGGGCG GATTGGCCTC AATACAGCGC TGCTGGAAGG CCCCCCCGGT
GAGCTCCTCA TCGACAAAGA CAAAGTGATG GCAGAAGCCA GCGACCGTGC ATCAAGGGCT
CAAAACACCC TGAAGCAAAA CGAACAATCA GCCGGATGA
 
Protein sequence
MAAAGSPQPN RPKAPQQAAN KPLQVMKINR KDEQEKLQRE AAEARAAAEA AAEKARMLEE 
RAGLAAPPRS RQAEASSQSD EERFDMGAME GMSMADLMGS PDDKPKREQR SEPRSVDDFD
FDEEAFLAAL DENAPVGTTG EVIKGTVIAL ESDGVYVDIG GKAPGFMPKS EAGLGVITNY
QERFPKGLEV EVLVTREQNA DGMVTISCRA LELRKSWDKV KVLEKEGKVV QVIVSGFNRG
GVTCDLEGLR GFIPRSQLQD GENHQELVGK TLGVAFLEVN SGTRKLVLSE KRAATAARFQ
ELEVGQLVEG LVASVKPYGL FIDLGGISGL LHQSSITNGS LRSIREVFDQ GDRVSALITD
LDPGRGRIGL NTALLEGPPG ELLIDKDKVM AEASDRASRA QNTLKQNEQS AG