| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_1623 |
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| Symbol | |
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| ID | 3743940 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9902 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007513 |
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| Strand | - |
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| Start bp | 1572734 |
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| End bp | 1573690 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637771814 |
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| Product | protochlorophyllide oxidoreductase |
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| Protein accession | YP_377625 |
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| Protein GI | 78185190 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | [TIGR01289] light-dependent protochlorophyllide reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.783305 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCAGCA CTCCTGGCAC TGTTCTGATT ACTGGGACCA CCTCTGGTGT CGGATTGAAC
GCCGCCAAGG CCTTGGCCTC CCGTGGATGG CAGGTGATCA CAGCAAACCG AAGTCCGCAG
CGGGCTGCTG CTGCTGCTGA TGCTTTGGGG ATTCCGAAAG AGCGTCTCCA GCACGTTCTG
ATGGATCTCG GTGATCTAGA AAGTGTGCGT CGGGCTGTGC AAAGTCTTCC GGTCTCCCTT
GATGCCGTTG TTTGTAATGC TGCGGTCTAT AAGCCGAAGT TGAAGCAGCC CGAGCGATCG
CCGCAGGGAT ATGAACTGTC CATGGCTACG AATCACCTTG GCCACTTTTT ACTGATTCAC
TTATTGCTCA ATCGTTTGAA GGGTTCGAAT CATCCATCTC GTCGTGTTGT GATTCTCGGC
ACTGTTACGG CAAATTCCAA AGAGTTGGGT GGAAAGATTC CAATTCCTGC ACCAGCTGAC
TTAGGCGATC TCTCGGGATT TCAAAAGGGC TTTTTGGACC CCATCGCGAT GGCAAGTGGC
AAAGCCTTCA AGCCTGGTAA GGCTTACAAA GACAGCAAGC TTTGCAACAT GATTACCACC
CAGGAGCTTC ATCAACGACT TCATCGAGAA ACGGGACTTA CATTTAGCTC GCTTTATCCG
GGCTGTGTTG CGGATTCACC TTTGTTCCGT AATACCCCGA AGGCATTTCA GACAATTTTC
CCGTGGTTTC AAAAAAATAT CACTGGCGGT TATGTCACTC AAGCTTTGGC GGGAGACCGT
GTTGCGCAAG TGGTGGCTGA TCCGGATTTT GCCGAGTCTG GGGTGCATTG GAGTTGGGGA
AATCGACAGA AGAAAGACGG TCAGCAATTT AGTCAGGAGT TATCAGAGAA GGCCACCGAC
CCAGAAACCG CATCAAGAGT TTGGACTCTG TCCAAACAGC TTGTAGGCCT TGAATGA
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| Protein sequence | MTSTPGTVLI TGTTSGVGLN AAKALASRGW QVITANRSPQ RAAAAADALG IPKERLQHVL
MDLGDLESVR RAVQSLPVSL DAVVCNAAVY KPKLKQPERS PQGYELSMAT NHLGHFLLIH
LLLNRLKGSN HPSRRVVILG TVTANSKELG GKIPIPAPAD LGDLSGFQKG FLDPIAMASG
KAFKPGKAYK DSKLCNMITT QELHQRLHRE TGLTFSSLYP GCVADSPLFR NTPKAFQTIF
PWFQKNITGG YVTQALAGDR VAQVVADPDF AESGVHWSWG NRQKKDGQQF SQELSEKATD
PETASRVWTL SKQLVGLE
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