Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9902_1616 |
Symbol | |
ID | 3741870 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9902 |
Kingdom | Bacteria |
Replicon accession | NC_007513 |
Strand | + |
Start bp | 1565451 |
End bp | 1566032 |
Gene Length | 582 bp |
Protein Length | 193 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637771807 |
Product | Ham1 protein-like |
Protein accession | YP_377618 |
Protein GI | 78185183 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0127] Xanthosine triphosphate pyrophosphatase |
TIGRFAM ID | [TIGR00042] non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.220346 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAGCCAGC TTTTGACCAT CGCCAGCGGC AACCCCAGCA AGGTCGCAGA GATCGAAGCC ATGCTCGGCC CTCTACCACT TGTTGTTCAA CGCCAACCCG ACGATTTGGA CGTTGAGGAA ACAGGGGACA CCTATGGAGA CAACGCCAAC CTGAAAGCCA CCGCCGCGGC CCTACGAACC AAAGGGTGGG CCATCGCCGA CGATTCCGGC CTAGAGGTGG ATGCGCTTCA GGGGGCTCCA GGCCTCTACT CAGCCCGCTA CGCAACTGGC GATCAAGCCA AAGTTCAACG AATCCTCGAT GAATTAGGCA ACACTCCTTA CCGAAGCGCC TGCTTCAGAA GCACGATGGT GCTCAGCGAT CCAACGGGCA ACTGCGTCGC AGCCGCGGAA GGGGTGTGCT GGGGAGAGAT TCTTAAAGCA CCTGCCTATC TCAATGGCGG GTACGAGTCG TTGCTTTGGG TGCGCGAAGC CGGCTGCACC TATGGCCAAC TCAATGAATC ACAACTCAGT CGACTGGGAA GCCGAGGCAA AGCAGCTCGC GCTTTGGCAA CACACCTAAA ACAATTTTTG AAGCTTCACT GA
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Protein sequence | MSQLLTIASG NPSKVAEIEA MLGPLPLVVQ RQPDDLDVEE TGDTYGDNAN LKATAAALRT KGWAIADDSG LEVDALQGAP GLYSARYATG DQAKVQRILD ELGNTPYRSA CFRSTMVLSD PTGNCVAAAE GVCWGEILKA PAYLNGGYES LLWVREAGCT YGQLNESQLS RLGSRGKAAR ALATHLKQFL KLH
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