Gene Syncc9902_1616 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_1616 
Symbol 
ID3741870 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp1565451 
End bp1566032 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content57% 
IMG OID637771807 
ProductHam1 protein-like 
Protein accessionYP_377618 
Protein GI78185183 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0127] Xanthosine triphosphate pyrophosphatase 
TIGRFAM ID[TIGR00042] non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.220346 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGCCAGC TTTTGACCAT CGCCAGCGGC AACCCCAGCA AGGTCGCAGA GATCGAAGCC 
ATGCTCGGCC CTCTACCACT TGTTGTTCAA CGCCAACCCG ACGATTTGGA CGTTGAGGAA
ACAGGGGACA CCTATGGAGA CAACGCCAAC CTGAAAGCCA CCGCCGCGGC CCTACGAACC
AAAGGGTGGG CCATCGCCGA CGATTCCGGC CTAGAGGTGG ATGCGCTTCA GGGGGCTCCA
GGCCTCTACT CAGCCCGCTA CGCAACTGGC GATCAAGCCA AAGTTCAACG AATCCTCGAT
GAATTAGGCA ACACTCCTTA CCGAAGCGCC TGCTTCAGAA GCACGATGGT GCTCAGCGAT
CCAACGGGCA ACTGCGTCGC AGCCGCGGAA GGGGTGTGCT GGGGAGAGAT TCTTAAAGCA
CCTGCCTATC TCAATGGCGG GTACGAGTCG TTGCTTTGGG TGCGCGAAGC CGGCTGCACC
TATGGCCAAC TCAATGAATC ACAACTCAGT CGACTGGGAA GCCGAGGCAA AGCAGCTCGC
GCTTTGGCAA CACACCTAAA ACAATTTTTG AAGCTTCACT GA
 
Protein sequence
MSQLLTIASG NPSKVAEIEA MLGPLPLVVQ RQPDDLDVEE TGDTYGDNAN LKATAAALRT 
KGWAIADDSG LEVDALQGAP GLYSARYATG DQAKVQRILD ELGNTPYRSA CFRSTMVLSD
PTGNCVAAAE GVCWGEILKA PAYLNGGYES LLWVREAGCT YGQLNESQLS RLGSRGKAAR
ALATHLKQFL KLH