| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_1615 |
|---|
| Symbol | |
|---|
| ID | 3741869 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus sp. CC9902 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007513 |
|---|
| Strand | - |
|---|
| Start bp | 1564793 |
|---|
| End bp | 1565104 |
|---|
| Gene Length | 312 bp |
|---|
| Protein Length | 103 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637771806 |
|---|
| Product | carboxysome shell peptide, CsoS1 |
|---|
| Protein accession | YP_377617 |
|---|
| Protein GI | 78185182 |
|---|
| COG category | [C] Energy production and conversion
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG4577] Carbon dioxide concentrating mechanism/carboxysome shell protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0557247 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTAACG AAACCATGGG TATCGCTCTC GGCATGATCG AGACTCGCGG CCTGGTTCCC
GCAATTGAAG CCGCTGATGC GATGACCAAA GCCGCCGAAG TGCGTCTTAT TGGTCGTGAG
TTCGTCGGCG GTGGTTATGT GACCGTTTTG GTCCGCGGTG AAACCGGCGC TGTTAACGCT
GCAGTGCGTG CAGGTGCAGA TGCTTGCGAG CGTGTGGGCG ACGGCCTGGT TGCTGCTCAC
ATCATTGCTC GCCCCCACCG CGAAGTGGAG CCTGCATTGG GCAATGGCAA TTTCCTTGGT
CAAAAGGACT GA
|
|---|
| Protein sequence | MANETMGIAL GMIETRGLVP AIEAADAMTK AAEVRLIGRE FVGGGYVTVL VRGETGAVNA
AVRAGADACE RVGDGLVAAH IIARPHREVE PALGNGNFLG QKD
|
|---|
| |