Gene Syncc9902_1609 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_1609 
Symbol 
ID3741863 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp1558082 
End bp1558333 
Gene Length252 bp 
Protein Length83 aa 
Translation table11 
GC content55% 
IMG OID637771800 
Productputative carboxysome peptide B 
Protein accessionYP_377611 
Protein GI78185176 
COG category[C] Energy production and conversion
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG4576] Carbon dioxide concentrating mechanism/carboxysome shell protein 
TIGRFAM ID[TIGR02704] carboxysome peptide B 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.179177 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGATCA TGCAGGTATC CGACACGTTG ATCTGCACCT TCCGCGTTGC CGGTTTGGAT 
CACATGCATT TGCGCATTCT TGTGAATAAC AAGGGCAAGA AACTGGTTGC TGTTGATCCT
GTAGGCGCCA GAAAGGGCAA CTGGGTTTTC ACCGCTAGCG GTTCGGCTGC GCGGCATGCC
TGCCCAGATA ACACCGTGCT TACCGATCTC ACCATCGGCG GGATCATCGA TCACTGGACG
CCGGACGGAT AG
 
Protein sequence
MEIMQVSDTL ICTFRVAGLD HMHLRILVNN KGKKLVAVDP VGARKGNWVF TASGSAARHA 
CPDNTVLTDL TIGGIIDHWT PDG