Gene Syncc9902_1601 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_1601 
Symbol 
ID3742571 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp1549314 
End bp1550456 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content44% 
IMG OID637771791 
Producthypothetical protein 
Protein accessionYP_377603 
Protein GI78185168 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.286212 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGTCAC TGATTCAAAA CAAGCCAAGA CAGAGGAGCC TTTTTCTCGA CCAGATCAAA 
GCGATCATGA TCGCTTTGGT GATCGCTTCC CATACTGTTC TACTCGCCAG CCTGTCCTCC
GATGGCGTCG GCCAACTCAT CAAAGATGCA CCACTATTTG AGGGCGTGAA TCTTTGGTTT
GTCTGGGTAA GCAATACATT TTTCATGAAT ATCTTATTTT TAATATCTGG ATATCTATTA
CCTGAATCGG TTCAAAAGCA AGGCCTTAAG CAGTTTGCCA AAAATCGCCT CATTCGCCTT
GGAATCCCTT TAATATTTAG CATAATCTTG ATTAATAATA TCTTACCAAT TGGCGGATTA
CTTGTACCTG ACAGCCCTGC ATTCGGCCAG AGCATCATCA ACCTACCGCT CAACAGAATC
GGACCACAAT GGTTTCTAGT TGTCTTGATT TTGTTCAATG CTCTGTATTG CATATGGGTA
GGCCTTCGCA AAACCAAATT TTCAATCAAT CAGGCAACAT CCGTTCCTGG ATGGAGATCT
TGGCTCATCA GTGCCATGAT TCTTGGACTA GCAGAAATGG AAATGAGCCA TTTCTCAAAT
GTTTGGATCA ACCTGAAGGA AACAAACCTA GATGGTCTTG GGTATCAAGG TATGCACCTA
TTCACCTATG GATTTCTCTT TGCCGTTGGC TGCAAGGCAG CATCCCATCG TTGGATTGAA
CGCATCAATC TACGTTTGGC ATCTTCATGG TTTCAAGCAT CTCTGTTGAT CAGCTTGACT
TTTTTGGCCA TCATGGTTGC AACTATTCTG ATGGGCAACA ATTCCTACTT CCTTCAGCAA
GCATTGCCAA TTTTATCGGC CCTCATTCCA TTCGTAGGCT GGGGCTATAT GGCTATGTTT
CTTACTTGGA CTCAGCAGCA TGAGCACATT GGCGGAGCAT GGTTAGCCCA AGCAGGACGA
GATGGCTTTG GTGCCTATTT GATTCACATG CCCATCCTCT ATGGATGTTT TATGCCCCTC
TACCTGTTAG GTATAACGAA TATTTGGATC CTGAGCCTAT CGGCCACGAT TTTGGCCATC
GTTCTGTCGT TTTGGGGAAG TCATCAATTG CGAAACATTC CTGCCGTCCG TCGCATCATC
TAA
 
Protein sequence
MESLIQNKPR QRSLFLDQIK AIMIALVIAS HTVLLASLSS DGVGQLIKDA PLFEGVNLWF 
VWVSNTFFMN ILFLISGYLL PESVQKQGLK QFAKNRLIRL GIPLIFSIIL INNILPIGGL
LVPDSPAFGQ SIINLPLNRI GPQWFLVVLI LFNALYCIWV GLRKTKFSIN QATSVPGWRS
WLISAMILGL AEMEMSHFSN VWINLKETNL DGLGYQGMHL FTYGFLFAVG CKAASHRWIE
RINLRLASSW FQASLLISLT FLAIMVATIL MGNNSYFLQQ ALPILSALIP FVGWGYMAMF
LTWTQQHEHI GGAWLAQAGR DGFGAYLIHM PILYGCFMPL YLLGITNIWI LSLSATILAI
VLSFWGSHQL RNIPAVRRII