Gene Syncc9902_1584 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_1584 
Symbol 
ID3742554 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp1532015 
End bp1533523 
Gene Length1509 bp 
Protein Length502 aa 
Translation table11 
GC content61% 
IMG OID637771773 
Productmalate:quinone oxidoreductase 
Protein accessionYP_377586 
Protein GI78185151 
COG category[R] General function prediction only 
COG ID[COG0579] Predicted dehydrogenase 
TIGRFAM ID[TIGR01320] malate:quinone-oxidoreductase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.285635 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCAAAACG ACGGCACGTT CGATCCGGAA GCCAGCTACG ACGCTGTGTT GGTGGGCGCT 
GGAATCATGA GCGCGACTCT CGCGGCGTTG CTGCATGAGC TGGACCCGCA GCTGCGCCTG
TTGCTGGTGG AACGCCTCGA GGCGCCAGCG TTGGAGAGCT CCGCTGCGGT GAACAACGCG
GGCACAGGGC ATGCAGCCAA CTGCGAACTG AATTACACCC CGATGCAACC GAATGGTCGG
GTCGCCACCG ATAAAGCCGT GGCCATCAAT GCCGCCTTTG AGCGCAGCCT TGAGTTCTGG
GGGTCTCTGC TCGAGCGAGG TCGGCTCACG TCCACCGATT TTCTGCATCG AGCAGCCCAT
ATCAGTGCCG TGTGGAGTCC TGCCAACATC GCTTTTCTGC GTCAGCGCTT TGAGCAGCTC
AAAGACATCC CAGCCTTTGC TGAGATGCGA TGGACCGAAG ATCGGCAGGA CTTAGCGGAG
TGGATGCCCC TGGTGATGGA GGGGCGCGAT CCCAACCAGG CGGTTGCTGC TACCCGGATT
GAGCGCGGAA CCGATGTGGA TTTTGGTGCG CTCACCCGGG CCTACCTGCT GCCGTTGCAG
AGCAGCGGTG CACTCACGGT GCAATACGGC ACCGAGGTGA GCAATCTCAA GCGATTGCGT
CGCCCCAACA TGACTGAAGG GGATTGGCGG GTGATCACCA AGGGGCCTTC CGGTCGACGT
GAGGTGCGTG CGCCCTTTGT GTTTCTTGGG GCCGGCGGTG GTGCCCTTCC GCTGTTGCAA
CGGTCGGGGA TTCCGGAAGG CGACGATTTT GCTGGCTTCC CGGTGAGCGG TCTTTGGCTG
GTGTGCAACG ACGCAGACCT GGCGGAACAG CAGCGGGCCA AGGTGTACGG CAAGGCGGCG
GTGGGGGCTC CACCGATGTC GGTGCCCCAC CTCGATACCC GTTGGATGGA TGGGCGTCGT
TCCCTGTTGT TTGGCCCCTT CGCCGGATTC AGCAGCAAAT TTTTAAAGCA GGGATCTCTG
CTGGATTTGC CGGCCTCGGT GCGGCCAACA AACCTCTTGC CGATGTTGCA AGTGGGAGCC
ACCAATATTG AGTTGGTGCG GTATTTGATC AATCAGCTGC GCCAGACCCC AGACCAACGC
TTTGATGCGC TTCGGGATTT TCTGCCAACA GCGCGCCAAG ACGACTGGAG TTTGTCGGTA
GCGGGCCAGC GGGTCCAGAT CATCAAACGC AGCAAAGAGG GCGGTCGCCT GCAACTCGGT
ACGGAAGTGG TGGCTGCCAG CGATGGCTCA TTGGCGGCGT TGTTGGGGGC ATCGCCAGGG
GCCAGTACGG CGGTGACGAT CATGTTGGAG GTGCTGCAGC GCTGCTTCCC AGAACGGCTC
GCCAGTGCGG ATTGGCAAGC ACGACTCAAG GCCTTGCTGC CGAGTTTCTA TAGCGATCCC
AAGAGCGATC CCGATGTGTT GAAGGGGATG CGGGAGCGCA GCGATGGCCT GTTGGGTCTC
AGCCGCTGA
 
Protein sequence
MQNDGTFDPE ASYDAVLVGA GIMSATLAAL LHELDPQLRL LLVERLEAPA LESSAAVNNA 
GTGHAANCEL NYTPMQPNGR VATDKAVAIN AAFERSLEFW GSLLERGRLT STDFLHRAAH
ISAVWSPANI AFLRQRFEQL KDIPAFAEMR WTEDRQDLAE WMPLVMEGRD PNQAVAATRI
ERGTDVDFGA LTRAYLLPLQ SSGALTVQYG TEVSNLKRLR RPNMTEGDWR VITKGPSGRR
EVRAPFVFLG AGGGALPLLQ RSGIPEGDDF AGFPVSGLWL VCNDADLAEQ QRAKVYGKAA
VGAPPMSVPH LDTRWMDGRR SLLFGPFAGF SSKFLKQGSL LDLPASVRPT NLLPMLQVGA
TNIELVRYLI NQLRQTPDQR FDALRDFLPT ARQDDWSLSV AGQRVQIIKR SKEGGRLQLG
TEVVAASDGS LAALLGASPG ASTAVTIMLE VLQRCFPERL ASADWQARLK ALLPSFYSDP
KSDPDVLKGM RERSDGLLGL SR