Gene Syncc9902_1583 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_1583 
Symbol 
ID3742553 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp1531679 
End bp1532005 
Gene Length327 bp 
Protein Length108 aa 
Translation table11 
GC content60% 
IMG OID637771772 
ProductSMR family multidrug efflux transporter 
Protein accessionYP_377585 
Protein GI78185150 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2076] Membrane transporters of cations and cationic drugs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.352831 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCCTTTGA ACAATCCCTG GACCCTGCTC CTTCTCGCCA TCAGCGCCGA AGTGATTGGC 
ACCTCTTGCC TACGACTCTC CGAGGGGATG ACACGACCGG TCCCCACACT GCTGGTGTTT
TCGGCCTACG CCATTGCCAT GGGGTTGCTC TCCAAGGTGG TGATGAGCCT CCCCCTTGGC
ATCACCTACG CCCTCTGGAG CGGCATCGGC ACCGTGGCGA TCGTTCTGGT GGGTCGCTTC
GCTTATCAAC AAACGATGGG AGTGGGGCAA CTGATCGGGA TCGCCCTGAT CACAGCGGGG
GTGGTGCTGG TGAACCTCAA GCAGTGA
 
Protein sequence
MPLNNPWTLL LLAISAEVIG TSCLRLSEGM TRPVPTLLVF SAYAIAMGLL SKVVMSLPLG 
ITYALWSGIG TVAIVLVGRF AYQQTMGVGQ LIGIALITAG VVLVNLKQ