Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9902_1579 |
Symbol | |
ID | 3741990 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9902 |
Kingdom | Bacteria |
Replicon accession | NC_007513 |
Strand | - |
Start bp | 1526785 |
End bp | 1527606 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637771768 |
Product | putative ABC transporter, oligopeptides |
Protein accession | YP_377581 |
Protein GI | 78185146 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCCGTT GGGGGCTCGT GATTGTTGGG CTGTACTTGC TGGTGGCCTT GATCACTCCA GTCTTGATCC ACTTGGGCTG GCTTCCCGAT GCCAATGCCG GACTGTCCAA CCCGATTTAC AACAGCCCGA GTTGGAGCCA CTGGTGTGGC ACCGATCGCC TGGGTCGAGA TGTGTGTGTT CGCACGATGG CCGGAAGTGG CGTGGCCCTC CAGGTGGTAC TGCTCGCTGT GGGTTTTGCC CTCGTGTTGG GTGTTCCCCT CGGAATGGTG AGCGGTTATT TCGGCGGAGC GATCGACCGA ACGCTGGTGC TGCTGATGGA CACCCTCTAC ACCCTGCCGG TGTTGTTGTT GTCGGTGGTG CTTGCTTTCC TGCTCGGTAA GGGCATCCCC AATGCCGCAG CGGCCCTCTG CGTTGTCTAT GTGCCCCAGT ACTTCCGGGT GGTGCGCAAC CAAACGGCAC AGGTCAAAAG TGAGTTGTTT GTGGAAGCAG CCCAGTCTCT TGGGGCCGGG CCGGTGTGGA TCTTGCGGCG CTACCTGTTT CGCAACGTGA TCACGTCGGT GCCGGTGTTG CTCACCCTGA ATGCTGCCGA TGCCGTTTTG GTGTTGGGCG GCCTTGGTTT CCTCGGCCTT GGCTTGCCTG AAACGGTGCC GGAGTGGGGA GGGGATTTGA ACCTCGCCCT CGCAGCCGTA CCCACGGGTG TTTGGTGGAC GGCTCTCTTC CCGGGCTTGG CGATGTTCAT CCTTGTGCTC GGTCTCTCCT TCCTTGGTGA GGGGATCGAG GCGTGGGTGA GCGGCGGCGA AGCACGTCCA GCATCAGACT GA
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Protein sequence | MARWGLVIVG LYLLVALITP VLIHLGWLPD ANAGLSNPIY NSPSWSHWCG TDRLGRDVCV RTMAGSGVAL QVVLLAVGFA LVLGVPLGMV SGYFGGAIDR TLVLLMDTLY TLPVLLLSVV LAFLLGKGIP NAAAALCVVY VPQYFRVVRN QTAQVKSELF VEAAQSLGAG PVWILRRYLF RNVITSVPVL LTLNAADAVL VLGGLGFLGL GLPETVPEWG GDLNLALAAV PTGVWWTALF PGLAMFILVL GLSFLGEGIE AWVSGGEARP ASD
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