Gene Syncc9902_1573 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_1573 
Symbol 
ID3741984 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp1520756 
End bp1521709 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content55% 
IMG OID637771762 
Productbacteriochlorophyll/chlorophyll a synthase 
Protein accessionYP_377575 
Protein GI78185140 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0382] 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases 
TIGRFAM ID[TIGR01476] bacteriochlorophyll/chlorophyll synthetase
[TIGR02056] chlorophyll synthase, ChlG 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0576608 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCGACG CACGTCAGCT GCTGGGCATG AAAGGTGCCT CAGGCACCAC CAATATTTGG 
AAGCTGCGGT TGCAGCTGAT GAAACCAGTC ACCTGGATTC CCTTGATTTG GGGGGTAATT
TGCGGAGCAG CAGCCAGCGG TAACTACCAC TGGCAGTCGG ATCACGTGCT GGCGGCATTC
GCTTGCATGC TGATGAGTGG TCCGCTGCTG GCTGGGTTCA CCCAGACCAT CAACGACTAC
TACGACAGAG AGATCGACGC GATCAATGAG CCGTACCGGC CCATTCCCTC TGGAGCAATT
TCCCTAGGGC AGGTGAAACT TCAAATCTGG ATCCTGCTGC TGGCTGGCCT CGGTGTGTCC
TATGGGCTCG ATGTGTGGGC CCAACACACC ACACCCGTGG TGTTCCTGCT GGCGCTGGGT
GGCTCCTTTG TGAGCTTTAT CTACTCAGCC CCTCCCCTGA AGCTGAAGCA GAACGGTTGG
CTCGGGAACT ATGCCCTCGG CGCGAGCTAC ATCGCGTTGC CATGGTGGGC CGGCCAAGCC
TTATTTGGGC AGCTCACCTG GACGACAGCA TTGCTCACCC TGGCCTACAG CTTGGCGGGA
CTGGGAATCG CGGTAGTGAA CGATTTCAAA AGCGTTGAGG GCGACCGTGC CCTTGGACTT
CAATCTCTTC CTGTGGTGTT TGGCATCAAA CGTGCCAGTT GGATCAGTGC AGGAATGATC
GATATTTTCC AACTCGCGAT GGTCGGGGTA TTGATTGCCA TTGGCCAGCA TTTCGCAGCT
GTTCTTCTGG TGCTGTTAAT CATTCCCCAG ATCACATTTC AGGACATCTG GCTGTTGACT
GACCCCGTTG AATTTGATGT GAAATATCAA GCCAGTGCTC AGCCTTTCTT AGTTCTTGGC
ATGTTGGTAA CGGCTTTAGC TGTTGGCCAC AGTTCTCTGA CCCAGGTGAT GTGA
 
Protein sequence
MSDARQLLGM KGASGTTNIW KLRLQLMKPV TWIPLIWGVI CGAAASGNYH WQSDHVLAAF 
ACMLMSGPLL AGFTQTINDY YDREIDAINE PYRPIPSGAI SLGQVKLQIW ILLLAGLGVS
YGLDVWAQHT TPVVFLLALG GSFVSFIYSA PPLKLKQNGW LGNYALGASY IALPWWAGQA
LFGQLTWTTA LLTLAYSLAG LGIAVVNDFK SVEGDRALGL QSLPVVFGIK RASWISAGMI
DIFQLAMVGV LIAIGQHFAA VLLVLLIIPQ ITFQDIWLLT DPVEFDVKYQ ASAQPFLVLG
MLVTALAVGH SSLTQVM