| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_1568 |
|---|
| Symbol | |
|---|
| ID | 3741979 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus sp. CC9902 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007513 |
|---|
| Strand | + |
|---|
| Start bp | 1517165 |
|---|
| End bp | 1518394 |
|---|
| Gene Length | 1230 bp |
|---|
| Protein Length | 409 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 637771757 |
|---|
| Product | HEAT repeat-containing PBS lyase |
|---|
| Protein accession | YP_377570 |
|---|
| Protein GI | 78185135 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.683606 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGAGC GATTTGATGT TCTTGTCCAG GGAATAAGTG AGCAAGATGC ACTCTCCCTA
TTAATGGCTC AGACCTCAAC TGTTCCAAGA CCTGCAGATC GATATTTTGC AGCAACTCGA
CTTGGATTGA GCAAGACCAA CGAATCTCTA GACGCACTAT TAACGGCAAC AAATAACCTC
AAAATTGATG AATTATATGA TCGAATAACA CGTAGAAAAG CTATTGAATC CTTGGGACGA
AGAAAGGATA AACGGGCAAT TCCAGCCTTA ACAAATGTTC TGACCTGTAC AGATACAGAG
GCTGTTATAA ACGCAATTTA TGCCCTTGTA CGCATCGATT GGGATCCAAG TGAAGAGAAC
AAAGATCTAC TCTTATCGCT TTTGAATGGA GAATGTACGT TGGTTCGAGC AGTGATTCAG
GCCCATACAA GACTCAACAT CAAACATTTA AAAGCCGAAA AATTGATTGC TGAGCTTTGT
GATCATGAAC AAGCCTTGAT TGCAGGTGCA GCACGAGCTT ATCAAGCAAA ACTTTATGGA
AAAACTGAAC TTTTAAATCC ACTTGAAACC CAGTTACTCG ATACCACTGC AGGAAAACGA
CGTTCGGCAG TGATCGATTT AGGCGATGCT ATAGACCCGA ATCGAATCAA GAGCTTGGTG
GATGCACCGA TCTCGATGTC GCTAAGAGCG AATAGTTGTT TTCAGATTAT TGATGACCGA
AATCAACTAC AGCAGAAACA TGTCATCTCA CAACTTGAGG TTCTTTTAAC TGATAATCCG
AAACATCTAA AGATCAGACC CGAATGGCAA TGCAAACCTA CTCCTGAAGA GATCGAACGA
TGCCTTAGCC ATCGAGATGA AGCGATTCAA TATGGAGCTG CACTAAGCCT GATGAATCTT
AATTCAGAGG ATTGCCTGAA AATTATTAAC AGCATGGAAG AAAGACTCTG GTCAGACTAT
GTGACACACT ATTACCTCAC TTGCATTGTA GGACTAAGAC AATTCTCTGA GAAAAGTTAC
TTAGTAAAAT CTGCTCTTGC AGAGACCACT CCGCAATACA CGAAGTCGAG GGTTGCAGCA
GCCTGGGCTT GCTTGAAACT CGATCTTTAT GATCAATTAG ACCTTCTTTA CCAGTTATCA
AGTTCCGCAT ACTGGAAGCC ACTGCGATGG TCTTGCCAAC AAGTGTTTGC CCGAATGATT
GATAAGCAAC AGTCTCAAAT AGAACTCTAG
|
|---|
| Protein sequence | MAERFDVLVQ GISEQDALSL LMAQTSTVPR PADRYFAATR LGLSKTNESL DALLTATNNL
KIDELYDRIT RRKAIESLGR RKDKRAIPAL TNVLTCTDTE AVINAIYALV RIDWDPSEEN
KDLLLSLLNG ECTLVRAVIQ AHTRLNIKHL KAEKLIAELC DHEQALIAGA ARAYQAKLYG
KTELLNPLET QLLDTTAGKR RSAVIDLGDA IDPNRIKSLV DAPISMSLRA NSCFQIIDDR
NQLQQKHVIS QLEVLLTDNP KHLKIRPEWQ CKPTPEEIER CLSHRDEAIQ YGAALSLMNL
NSEDCLKIIN SMEERLWSDY VTHYYLTCIV GLRQFSEKSY LVKSALAETT PQYTKSRVAA
AWACLKLDLY DQLDLLYQLS SSAYWKPLRW SCQQVFARMI DKQQSQIEL
|
|---|
| |