| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_1522 |
|---|
| Symbol | |
|---|
| ID | 3743712 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus sp. CC9902 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007513 |
|---|
| Strand | - |
|---|
| Start bp | 1473199 |
|---|
| End bp | 1474620 |
|---|
| Gene Length | 1422 bp |
|---|
| Protein Length | 473 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637771709 |
|---|
| Product | apolipoprotein n-acyltransferase |
|---|
| Protein accession | YP_377524 |
|---|
| Protein GI | 78185089 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0815] Apolipoprotein N-acyltransferase |
|---|
| TIGRFAM ID | [TIGR00546] apolipoprotein N-acyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGCGATC TCCGACTGTC TGCTGGATGG CGTGCCGTGA TTGGCGGCGT GCTCGCAGGA
CTGGCCCCCT CTTTGGGCGG GCCCCTTCTG ATGCTGCCTG CGTTGACGTT GCTGTGGTCG
TTCGCTGAAC GCACCCGCTG GTGTGCCGCT TGGGGTTTGC TCGCTGTTCT GGTGAGCCAT
GCCTGGATGC TCTCTCTGCA TCCACTTACC TGGATGGGTG TGCCTGCCCT GTTGAGCCTT
CCGGTGGCGA TCACCCTTTG GTTGAGCTGC GGCAGTTGTG CGGCGGCGTT GCTGGCGGTG
TGGTCGCTAG TGCTCCAGCA AGGTCGTCGT TGGTTTCCGC GATTGGCGCC CTGGTGGCGT
GCGGGTGTTC TCGCATTGAT TTGGGCCTGG GCTGAGCTGG TGTTGTCGGG TTCGCCGTTG
TTTTGGATCG GGGTTGGTGG CAGCACCTTG CCCTGGGACC TTCCGCTCGC TGGCTTGTCC
CGTTGGTTTG GTTCCGGGGG CCTGGTTGTG GTTCAGCTGA TGTGGGCCTG GTGGATTTGT
GGCTTGGTGG AGCGTCGAGC CATCAACCGT CGTCCCGCAA ACCGTCGTGG CTTATGGATC
GGGTTTGCCA GCCTTCTGCT GGCCCATGGT CTAGGCGCTT TGCTTTTGGC GAAAGCACCT
CCAGTGACCG GTGCTCTCTC GATGGCCGTT TGGCAGCCAG CGGTGCCAAC CCGTGAAAAG
TTGGATCCGG AGCAACAGCG TCAGCTTCCT CAGGCTTTGC TCGCAGCGTT GCAGGGGGCA
GAAGGCAAGC AGGTGGATGC TTTGGTAGCG CCGGAGGGTG TGCTTCCGTC CCGTTGGCGT
ATGCCCCAGG GGGCAGCGAA TGTGCCCCTG ATCAGTGGTG GTTTCCGCTG GGTGAGGGGG
GAGCAGCGCA GCGCACTGTT GTTTTTTTCC CCTGGCGCTG AACATCCAGT TCCCCTGCTC
GATAAACATC GGTTGGTGCC CATTGGGGAG TGGATGCCGC CGCTCCCGTC GGGAGTCAAT
GCCGGTTTAT CGGCGGTAGG GGGGCTGCAT CCAGGCGCTG CATCGCGGCT GTTTACCGTT
TTCGATTCCC CTGCTGCTGG GGCCATTTGC TACGAAATTG CTGATGGCAG CTCCCTTGCT
TTGGCCGCAT CCGAGGGGGC GGATTGGCTG CTCTCTATCG CCAATCTCGA TCCGTACCCC
TTGCAGCTGC AGCAACAGTT TTTGGCGTTG GCGCAGCTGC GCGCCATCGA AGCGGGTCGT
GACCTGCTCA GCGTCGCGAA TACGGGGCCG ACGGCTCTGA TTTCAGCCGA CGGCCATGTG
GAGCGACTGT TACCACCGAT GCAGGCCGGA CTCGCCAAGG TGACGGTTCA GCGTCGCCAA
GCCATCAGCT TTTATTCCTG GTTGGTGTCG AAGTCCCGCT GA
|
|---|
| Protein sequence | MGDLRLSAGW RAVIGGVLAG LAPSLGGPLL MLPALTLLWS FAERTRWCAA WGLLAVLVSH
AWMLSLHPLT WMGVPALLSL PVAITLWLSC GSCAAALLAV WSLVLQQGRR WFPRLAPWWR
AGVLALIWAW AELVLSGSPL FWIGVGGSTL PWDLPLAGLS RWFGSGGLVV VQLMWAWWIC
GLVERRAINR RPANRRGLWI GFASLLLAHG LGALLLAKAP PVTGALSMAV WQPAVPTREK
LDPEQQRQLP QALLAALQGA EGKQVDALVA PEGVLPSRWR MPQGAANVPL ISGGFRWVRG
EQRSALLFFS PGAEHPVPLL DKHRLVPIGE WMPPLPSGVN AGLSAVGGLH PGAASRLFTV
FDSPAAGAIC YEIADGSSLA LAASEGADWL LSIANLDPYP LQLQQQFLAL AQLRAIEAGR
DLLSVANTGP TALISADGHV ERLLPPMQAG LAKVTVQRRQ AISFYSWLVS KSR
|
|---|
| |