Gene Syncc9902_1508 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_1508 
Symbol 
ID3743698 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp1458327 
End bp1459532 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content59% 
IMG OID637771695 
ProducttRNA (guanine-N1-)-methyltransferase 
Protein accessionYP_377510 
Protein GI78185075 
COG category[I] Lipid transport and metabolism
[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0245] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
[COG0336] tRNA-(guanine-N1)-methyltransferase 
TIGRFAM ID[TIGR00088] tRNA (guanine-N1)-methyltransferase
[TIGR00151] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGACCT ATCGCCTTGA CGTGGTGACC CTGGCTCCCC AGGCGTTTGC TCCTTTATTG 
GAGTTGGGTG TGATCGGGCG AGCCTTCTCC GCTGGGATTG CGGAGATGCA TCTGCACAAT
CCACGGGAGT TCGCCACCGA TCGTCACCGC AAAGTGGATG ACGTGCCCTA CGGCGGTGGT
GCCGGAATGG TGCTTAAGCC CGAACCGGTG TTTGCCGCCA TGGAGTCGGT GCCGCGCTGT
CCACGCTCCA GGGTTTTGCT GATGTCTCCC CAGGGACGCC CGTTACAGCA GAGCGATCTT
CAACGCTGGT CGCGGGAGTT CGATCAGTTG GTGTTTCTCT GTGGGCATTA CGAAGGGTTT
GATGAACGCA TTCGCGGCCT CGCAGATGAG GAGGTTTCGA TCGGAGATTT TGTGCTCACC
GGTGGGGAAT TGCCCGCGAT GACCGTGATC AATGGTGTGG TGCGATTACT CCCCGGGACG
GTGGGGGCCC CCGATTCGTT GGTGGAGGAG AGTCACAGCA CGGTGTTACT GGAACACCCT
CACTACACCC GGCCTGCGGA CTTCAGAGGG ATGACGGTGC CCGCGGTGCT TCGCAGTGGA
GACCATGGAG CGATTGCGAA CTGGAGGCAG CAACAGCGTG AGCTGCGAAC CCAGGAACGC
CGGCCGGATC TTTGGACGCG GTGGCAAACC GAGAGAATGG AGCTCCCTTG CGACACCGCC
ATGCAGTTGC GTATCGGCAA CGGTTACGAC ATGCACCGGT TGGTGAAGGG TCGACCTTTA
ATCCTTGGTG GCGTGACCTT GGATCATCCG GATGGACTCG GTTTGGATGG CCACAGTGAT
GCCGATGTGT TGGTGCATGC CGTGATGGAT GCCCTGCTGG GCGCGTTATC CCTCGGGGAT
ATCGGTAAAT ATTTCCCGCC GACCGACCCC AAGTGGAAGG GTGCTGACAG TTTGATGCTG
CTGGAGCAGG TGGTTCAGCT TGTGGGCAAT CAGGGCTGGC AGGTGGTGAA TCTTGATGCT
GTTGTGATTG CGGAGCGGCC CAAGCTCAAG CCCCATATCG AAGTCATGCG ATCGAACATC
GCGATGCGCA TTGGCATCGC CGGAGATGCT GTTGGTGTCA AAGCAACCAC CAATGAAAAG
CTGGGTGCAG AGGGCCGTGA AGAGGGGATC AGCTGCCATG CCGTGGCGCT CTTGCAGAAA
CCATGA
 
Protein sequence
MATYRLDVVT LAPQAFAPLL ELGVIGRAFS AGIAEMHLHN PREFATDRHR KVDDVPYGGG 
AGMVLKPEPV FAAMESVPRC PRSRVLLMSP QGRPLQQSDL QRWSREFDQL VFLCGHYEGF
DERIRGLADE EVSIGDFVLT GGELPAMTVI NGVVRLLPGT VGAPDSLVEE SHSTVLLEHP
HYTRPADFRG MTVPAVLRSG DHGAIANWRQ QQRELRTQER RPDLWTRWQT ERMELPCDTA
MQLRIGNGYD MHRLVKGRPL ILGGVTLDHP DGLGLDGHSD ADVLVHAVMD ALLGALSLGD
IGKYFPPTDP KWKGADSLML LEQVVQLVGN QGWQVVNLDA VVIAERPKLK PHIEVMRSNI
AMRIGIAGDA VGVKATTNEK LGAEGREEGI SCHAVALLQK P