Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9902_1508 |
Symbol | |
ID | 3743698 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9902 |
Kingdom | Bacteria |
Replicon accession | NC_007513 |
Strand | - |
Start bp | 1458327 |
End bp | 1459532 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637771695 |
Product | tRNA (guanine-N1-)-methyltransferase |
Protein accession | YP_377510 |
Protein GI | 78185075 |
COG category | [I] Lipid transport and metabolism [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0245] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [COG0336] tRNA-(guanine-N1)-methyltransferase |
TIGRFAM ID | [TIGR00088] tRNA (guanine-N1)-methyltransferase [TIGR00151] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCGACCT ATCGCCTTGA CGTGGTGACC CTGGCTCCCC AGGCGTTTGC TCCTTTATTG GAGTTGGGTG TGATCGGGCG AGCCTTCTCC GCTGGGATTG CGGAGATGCA TCTGCACAAT CCACGGGAGT TCGCCACCGA TCGTCACCGC AAAGTGGATG ACGTGCCCTA CGGCGGTGGT GCCGGAATGG TGCTTAAGCC CGAACCGGTG TTTGCCGCCA TGGAGTCGGT GCCGCGCTGT CCACGCTCCA GGGTTTTGCT GATGTCTCCC CAGGGACGCC CGTTACAGCA GAGCGATCTT CAACGCTGGT CGCGGGAGTT CGATCAGTTG GTGTTTCTCT GTGGGCATTA CGAAGGGTTT GATGAACGCA TTCGCGGCCT CGCAGATGAG GAGGTTTCGA TCGGAGATTT TGTGCTCACC GGTGGGGAAT TGCCCGCGAT GACCGTGATC AATGGTGTGG TGCGATTACT CCCCGGGACG GTGGGGGCCC CCGATTCGTT GGTGGAGGAG AGTCACAGCA CGGTGTTACT GGAACACCCT CACTACACCC GGCCTGCGGA CTTCAGAGGG ATGACGGTGC CCGCGGTGCT TCGCAGTGGA GACCATGGAG CGATTGCGAA CTGGAGGCAG CAACAGCGTG AGCTGCGAAC CCAGGAACGC CGGCCGGATC TTTGGACGCG GTGGCAAACC GAGAGAATGG AGCTCCCTTG CGACACCGCC ATGCAGTTGC GTATCGGCAA CGGTTACGAC ATGCACCGGT TGGTGAAGGG TCGACCTTTA ATCCTTGGTG GCGTGACCTT GGATCATCCG GATGGACTCG GTTTGGATGG CCACAGTGAT GCCGATGTGT TGGTGCATGC CGTGATGGAT GCCCTGCTGG GCGCGTTATC CCTCGGGGAT ATCGGTAAAT ATTTCCCGCC GACCGACCCC AAGTGGAAGG GTGCTGACAG TTTGATGCTG CTGGAGCAGG TGGTTCAGCT TGTGGGCAAT CAGGGCTGGC AGGTGGTGAA TCTTGATGCT GTTGTGATTG CGGAGCGGCC CAAGCTCAAG CCCCATATCG AAGTCATGCG ATCGAACATC GCGATGCGCA TTGGCATCGC CGGAGATGCT GTTGGTGTCA AAGCAACCAC CAATGAAAAG CTGGGTGCAG AGGGCCGTGA AGAGGGGATC AGCTGCCATG CCGTGGCGCT CTTGCAGAAA CCATGA
|
Protein sequence | MATYRLDVVT LAPQAFAPLL ELGVIGRAFS AGIAEMHLHN PREFATDRHR KVDDVPYGGG AGMVLKPEPV FAAMESVPRC PRSRVLLMSP QGRPLQQSDL QRWSREFDQL VFLCGHYEGF DERIRGLADE EVSIGDFVLT GGELPAMTVI NGVVRLLPGT VGAPDSLVEE SHSTVLLEHP HYTRPADFRG MTVPAVLRSG DHGAIANWRQ QQRELRTQER RPDLWTRWQT ERMELPCDTA MQLRIGNGYD MHRLVKGRPL ILGGVTLDHP DGLGLDGHSD ADVLVHAVMD ALLGALSLGD IGKYFPPTDP KWKGADSLML LEQVVQLVGN QGWQVVNLDA VVIAERPKLK PHIEVMRSNI AMRIGIAGDA VGVKATTNEK LGAEGREEGI SCHAVALLQK P
|
| |