Gene Syncc9902_1475 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_1475 
Symbol 
ID3742359 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp1429710 
End bp1430738 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content45% 
IMG OID637771664 
Producthypothetical protein 
Protein accessionYP_377481 
Protein GI78185046 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCAGG AAACTCAGGA CTTTCTGGAC TTTATAGATC GAGAGCTTAA TCCAGGCACT 
ATCACCATTG AGAAATGGAA GAAGTATCTC AAAAAGCTTC CCCAGATCTA CAACGGCGAC
ATAGCATTCC GATTGCTATT CGATTGGCAC TGGGACCGAA CAAATAGCAT AGGACGCGCA
TTCTTCAAAC ACGACTCACT TAATACGGAA GATTACATTT ACACCAAGCA AGTGGAAATA
ATCGGAAGCG CAGGCATGCA TTTCCATAAC CTTGGATATC AATACCAGGA GCTTATCAAA
TGCCACGCAC GATGCGACTT TCTAGGCAAG TCTATTCTTG AAATTGGAGG ATCACTTCCC
AACGACCTAC TCTTCGAACA TCTTGGGATT GAGTCATACA TCAACATCGA ATCTCCTGAC
TATATTGAAG CCAAGTCAGG CTCGACATAT AGCTCCAAGC ACGGCGACCA CGAGAGGAGA
CAAACAATCT TCTGCAATGC GGAAGAGATC GACAAGAAAG TCAACAACGA ATCAATCGAC
AGCATCTTTT CGGTCGCATG CTTTGAACAT ATTTACGACC TACCAGCAGC ACTAGAAGCA
TGCCATGCTT GCAGCAAGAA GGGAGGCACC CTCTATTCAT TCTTCGCACC AATTTATTCA
CAAATCGACG AAGGAGACCA TGGCGTCATC CCTCAGCATG AGAGATTCCC AGAGAAGCCC
ATCGGACTTC ACTTACTCTC ACGAGAAGAT CAGAGAAAGA AACTGATCAG CGCAGGCATT
ACCGACCCCA AAGAGATCCA AGACTTTTTG GGTCGAGTCA ACTTCAACCG AGTCCCCAAT
CGTCTTCTCT ACAAAGACTA TGAAAGGATC TGCACCGAAT CTCCATATGC CGTTTTAGAG
CTTGATCGGC AAGATGAATA CAACATATCC AAAAGATTCC CGCGTCAGTT TGCAGAGGTT
AGATCATCCA ACATACATAT CAACAATATG ATGACATTGG GTTTCAGGAT TCATCTACTA
AAAGCATAA
 
Protein sequence
MKQETQDFLD FIDRELNPGT ITIEKWKKYL KKLPQIYNGD IAFRLLFDWH WDRTNSIGRA 
FFKHDSLNTE DYIYTKQVEI IGSAGMHFHN LGYQYQELIK CHARCDFLGK SILEIGGSLP
NDLLFEHLGI ESYINIESPD YIEAKSGSTY SSKHGDHERR QTIFCNAEEI DKKVNNESID
SIFSVACFEH IYDLPAALEA CHACSKKGGT LYSFFAPIYS QIDEGDHGVI PQHERFPEKP
IGLHLLSRED QRKKLISAGI TDPKEIQDFL GRVNFNRVPN RLLYKDYERI CTESPYAVLE
LDRQDEYNIS KRFPRQFAEV RSSNIHINNM MTLGFRIHLL KA