Gene Syncc9902_1459 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_1459 
Symbol 
ID3742345 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp1417908 
End bp1418825 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content54% 
IMG OID637771649 
Productputative histone deacetylase/AcuC/AphA family protein 
Protein accessionYP_377467 
Protein GI78185032 
COG category[B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGCTCGTC CTGTTGTTTA CCACCCGCGC TACTCCGCTG AATTGCCGAG CACCCATCGC 
TTTCCGATGG CGAAGTTCAA GTTGTTGCAT CAGCTCCTGC TTGATCAAGG ACTGATTGAG
CGCAAGCAGA TTCACGTTCC CCTCAGCATC GCTCGGCGTG ATCTGGAAGA GATCCATCCG
CGTCGATATC ACGAAACGTT CAGCCGCGAT CAACTCACTC GGCCTGAACA ACGACGAATT
GGGTTGCCTG CAACTTCGGC ATTGGTGCAA CGCACATGGC TTGCAGTGGG GGGGACGTTG
CTGACGGCTC GGTTGGCGCT TCGGTATGGA CTTGCCAACC ATCTGGCAGG GGGCACACAC
CACGCCCATC CTGACTTTGG GAGCGGCTTT TGCATTTTTA ATGACTGTGC TGTGGCCGCG
AAGGTTCTTC TTCGACGACG TGAAGTCGAA AGAATTTTAA TTGTGGATTT AGATGTGCAC
CAAGGCGATG GATCCGCCGC CTGTTTTCAG ACGGATGAAC GTGTCACGAC TTTTTCGGTA
CATGCCGCGA GCAACTTTCC CCTTCGGAAA GTGAACAGTG ATATTGATAT TCCTCTGCCC
GATGGAACCG AAGATGGGGA CTATCTCGCC GCCATCGGTG ATCAACTCCC CAATGTGTTG
GATGAACTCA AGCCACAACT TGTTTTGTTC AATGCGGGGG TTGATCCCCA TCGAGACGAC
CGACTCGGTC GTCTTCACTT GAGTGACGAC GGGCTCTTGA TGAGAGATCG ATTGGTTTTG
GATGCGTGTT TGCGACGAAA AATCCCGGTA GCAACGGTGA TCGGCGGTGG ATACGACACT
TTGGAGCCGT TGGTGCGTCG ACACGCCATC GTGTTTCGTG CAGCGGCAGA ACAGGCCCGA
CTTTTCAACC TGGCATGA
 
Protein sequence
MARPVVYHPR YSAELPSTHR FPMAKFKLLH QLLLDQGLIE RKQIHVPLSI ARRDLEEIHP 
RRYHETFSRD QLTRPEQRRI GLPATSALVQ RTWLAVGGTL LTARLALRYG LANHLAGGTH
HAHPDFGSGF CIFNDCAVAA KVLLRRREVE RILIVDLDVH QGDGSAACFQ TDERVTTFSV
HAASNFPLRK VNSDIDIPLP DGTEDGDYLA AIGDQLPNVL DELKPQLVLF NAGVDPHRDD
RLGRLHLSDD GLLMRDRLVL DACLRRKIPV ATVIGGGYDT LEPLVRRHAI VFRAAAEQAR
LFNLA