Gene Syncc9902_1443 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_1443 
Symbol 
ID3743519 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp1404251 
End bp1405393 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content56% 
IMG OID637771633 
Productphage integrase family protein 
Protein accessionYP_377451 
Protein GI78185016 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0279808 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAGCCTT TTCGCGATCA GGTTCGAGCC TCCACGGCGT CTGATTGGTG GGTGCTCAAT 
AACCGTGGAC GGATGCGCTT GCAGGTCAAA GGAGTAGGCA GTATTTCCCT CCCGTACCCA
TGGACCCTTG AAGGCTCGAC TCAAGGGCTG CCTCGCATTC AGCAGATCTT CAAGCGTTGG
GCAAATGGGC AGATCACTCT GGCTCAGGCT GCTCAGTCCG CAAATACCTC CAGCAGCCAT
CAACAACTGA ATTTCAGCCA GTTGATTGAT AAATATCGGC AGTTTGTCCC TAATGCGGGC
GAGACCACTT GGAAGACGTT TTACCTGCCC GTCCTGCGTA ATTGCACCAA GGCATTCAGT
GACCGACCAC CAGTGGACGG TGAAGCTCTT TGCATCGCAT GCCTGCAGCA ATGGGAGCAG
GGTTCACGGA TGCGCCAAAC CAGCCGCCAG AAGCTTTATG GCTTCCTGAA TTGGGCGGTG
CAGCGTGGAC ACCTGAAGCC CATTTACAGC CCGCCTGCGA CGTTGCCAGA GGTGCTGAAG
CCCAAGCGTG TTGGCTATCC CCTCAGCGAT GCACAGATCC TGCAGTTGCT CGACAACCTC
CCTGAAGGCG ACCCCCACAA CCAATGGCGG TTTGCCATTC AGCTTTGTGC TGTTTATGGG
TTACGCCCTG AAGAACTGAG GCACCTGCGA ATCAAGAGCG GGGCAAGCGG ATCTGAACTT
TGGACGATTT ACCGCAAGTC GATGGGCGGT ACCAAGGGAG CCAAGACCGA ACCACGGCGA
TTACATCCGT TATTGCTTCG TGATGCCGAT GGAACGGCGA TCGATTGGAA CCTTCAGGCG
CGTTTGGCAG TGTGCGAAAA GCTGCCGCCG TTGAACCGTG AAGGTGATGG AGGGCAAGCG
TTGAATCAAT ACCTGCGCCG CCGTGAGATG TGGATGGCAC TGCGAGACGA GGCAGAACAC
AACGGCGAGC AATTAACGCC GTATTCCTTT CGTCATCGCT ATGCCAAGCA AGCCCATGCA
GCGCGTCTAG CTGTGGCTGA AATCTCAGAA GCTATGGGTC ACACCATCGA GGTTCATCTG
AAGAGCTACG CGAGGTTCAA GCCAGACAAG ACCGCCGCCA ACTTCGCAGC TGTGAATATT
TAG
 
Protein sequence
MKPFRDQVRA STASDWWVLN NRGRMRLQVK GVGSISLPYP WTLEGSTQGL PRIQQIFKRW 
ANGQITLAQA AQSANTSSSH QQLNFSQLID KYRQFVPNAG ETTWKTFYLP VLRNCTKAFS
DRPPVDGEAL CIACLQQWEQ GSRMRQTSRQ KLYGFLNWAV QRGHLKPIYS PPATLPEVLK
PKRVGYPLSD AQILQLLDNL PEGDPHNQWR FAIQLCAVYG LRPEELRHLR IKSGASGSEL
WTIYRKSMGG TKGAKTEPRR LHPLLLRDAD GTAIDWNLQA RLAVCEKLPP LNREGDGGQA
LNQYLRRREM WMALRDEAEH NGEQLTPYSF RHRYAKQAHA ARLAVAEISE AMGHTIEVHL
KSYARFKPDK TAANFAAVNI