Gene Syncc9902_1404 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_1404 
Symbol 
ID3742114 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp1369270 
End bp1369557 
Gene Length288 bp 
Protein Length95 aa 
Translation table11 
GC content55% 
IMG OID637771592 
ProductRNA-binding region RNP-1 
Protein accessionYP_377412 
Protein GI78184977 
COG category[R] General function prediction only 
COG ID[COG0724] RNA-binding proteins (RRM domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.187524 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCATTT ACATCGGCAA TCTCTCGTTC CAGGCAGAAC AAGAGCATCT TTCTGACCTG 
TTTGCCGAGT ACGGCGAAGT TAAAAATTGC AGTCTTCCAC TCGACCGCGA AACGGGCCGT
AAGAGAGGTT TCGCATTCGT TGAGATGGTG AACGACGCAG ACGAGCAAAA GGCCATCGAT
GACCTTCAAG ACGTGGAATG GATGGGCCGG ATGATTCGCG TGAGTAAAGC CACCCCGCGG
GAACGTTCTG GTGGTCCCCG TGGCGGCGGC GGCGGTTATC GCGATTGA
 
Protein sequence
MTIYIGNLSF QAEQEHLSDL FAEYGEVKNC SLPLDRETGR KRGFAFVEMV NDADEQKAID 
DLQDVEWMGR MIRVSKATPR ERSGGPRGGG GGYRD