| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_1390 |
|---|
| Symbol | |
|---|
| ID | 3742521 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus sp. CC9902 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007513 |
|---|
| Strand | - |
|---|
| Start bp | 1355702 |
|---|
| End bp | 1356145 |
|---|
| Gene Length | 444 bp |
|---|
| Protein Length | 147 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 637771576 |
|---|
| Product | putative ribosomal-protein-alanine acetyltransferase |
|---|
| Protein accession | YP_377398 |
|---|
| Protein GI | 78184963 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0456] Acetyltransferases |
|---|
| TIGRFAM ID | [TIGR01575] ribosomal-protein-alanine acetyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.484383 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGTTA TCACACTTGA CCCATCGTGG TTGGCCGATT GCTTGGCCCT TGATCGCTGT
GCTCTTCAGG GTCTTTGGAC CGAAGACCAA TGGCGCCGCG AATTGGAGGA GCCAAGACGC
CTATGCCTTG GCTGGACTGA GGACATGTCG TTGTTAGGTG TGGCCTGTGG CTGGCTTGTC
GCTGATGAAT TGCATATCAC GGTGGTTGCC GTCGATCCGT CCGTGAGGCG TCGGGGTCAT
GGCAAACGAT TGTTGTCGGC TCTGTTGCAA CGGGCACGGC AACAAGGTGC CATCCACGCC
ACTCTCGAAG TGGCCAATCA CAATTCTGCT GCGATAGCCC TTTATGCAAG TGGCGGATTT
CAATCCGCTG GCACTCGAAC CAAGTACTAC AGCGATGGAA GCGATGCCCT GATTCAGTGG
TGTCGGATCA GTCCGTCGAA ATAG
|
|---|
| Protein sequence | MAVITLDPSW LADCLALDRC ALQGLWTEDQ WRRELEEPRR LCLGWTEDMS LLGVACGWLV
ADELHITVVA VDPSVRRRGH GKRLLSALLQ RARQQGAIHA TLEVANHNSA AIALYASGGF
QSAGTRTKYY SDGSDALIQW CRISPSK
|
|---|
| |