Gene Syncc9902_1381 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_1381 
Symbol 
ID3742512 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp1341572 
End bp1342459 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content41% 
IMG OID637771565 
Producthypothetical protein 
Protein accessionYP_377389 
Protein GI78184954 
COG category[S] Function unknown 
COG ID[COG3220] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0499971 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTCAT CCACAACATT GGCCCCACAA CGTCTATCAA CCGGGCTTAA AAGAATGTCT 
GCCGGACTGA ACCTGTGCCA TGAGAATTCC CAAGAACTAT TTGATCAAAG GCCAAATTTA
GATTTTATTC AAATACATCC TGAGCACCTT CTGCAAGAGC AAGGCGGAAC CTACAGGGAA
CACCTAGATA TACTAAGACA TCATTATCAA GTTATTCTTC ATGGATTTGG CCTATCGATA
GGTTCATCAG GCCCGCTTGA TAAAGAATAT CTGTTACTGA TTAAAAACCT ACTAAAAGAA
CATCCTGAAG CAGTCTTCTC AGATCACTTT TCTTGGAGCT CGCTATCAAA GCATCACTTC
CACGACTTGA TACCGCTTAT TCAATCAGAT GAAACAGTGC AATACATGGT CGAAAGGATC
GATGAAGCAC AAGAAGCCAT AGGGGCTCCA ATCCTTTTGG AAAACATAAG CAGCTATATG
CGCTACAAAG AATCAGAAAT GTCTGAAATA CAGTTCATCA ATGAAATAAC AAAAAGGTCA
GGATGCTTTG TACTGCTTGA TGTAAATAAC ATTTGGGCCA ATGCGATGAA TTTCGGAGAA
AATCCATGGG AAACGCTTAG TCAGATCAAT GCTGACAGTA TTAAAGGGTA TCATCTAGCA
GGATGTACGG AGGAACAAAA AGGAAATGGG AAAGTCTATA TCGATTATCA TGGCGAGGCC
GTGCACGACG AAGTCTGGGA TCTATACAAA CAATGCTTAG AAAAATATGG GGCATGGCCC
ACACTTTTAG AATGGGAAAA TAATATTCCA CCGCTAACAC GCACACTTCA AGAGGTTGAA
AAGATTAGCG ATTGCTTCAA AACACTCCAG GAAGGTGCAA ATTCATGA
 
Protein sequence
MNSSTTLAPQ RLSTGLKRMS AGLNLCHENS QELFDQRPNL DFIQIHPEHL LQEQGGTYRE 
HLDILRHHYQ VILHGFGLSI GSSGPLDKEY LLLIKNLLKE HPEAVFSDHF SWSSLSKHHF
HDLIPLIQSD ETVQYMVERI DEAQEAIGAP ILLENISSYM RYKESEMSEI QFINEITKRS
GCFVLLDVNN IWANAMNFGE NPWETLSQIN ADSIKGYHLA GCTEEQKGNG KVYIDYHGEA
VHDEVWDLYK QCLEKYGAWP TLLEWENNIP PLTRTLQEVE KISDCFKTLQ EGANS