| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_1373 |
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| Symbol | |
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| ID | 3742877 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9902 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007513 |
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| Strand | - |
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| Start bp | 1331864 |
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| End bp | 1332823 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637771557 |
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| Product | cell envelope-like transcriptional attenuator |
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| Protein accession | YP_377381 |
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| Protein GI | 78184946 |
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| COG category | [K] Transcription |
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| COG ID | [COG1316] Transcriptional regulator |
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| TIGRFAM ID | [TIGR00350] cell envelope-related function transcriptional attenuator common domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.125598 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCTCTT CCAAAGAGAC GCGCTTGACG CGCTGGTTTG GACGTCGTCC ATTGAGAACA
GTCTTGCGCC TGGGAGCGAT CGCCTTAGGT GTGGGTGCGA CGGGTTGGCT GCTCAGCGTG
CTTTGGCCCG AGCCAGATCG CGCCGCCAAA GAGGCTTCAA CCAAGTCGGA AGCCATGACT
AACTTGGCTC CGTTCCCCTC CGCGCCTGTG ATGGTGCTTG TGGTGGGGAT TGATGCCAAT
CAGCTTGGTG AATCGTCCAA TCAAGCCGCA CCATTGGGTC GAGCCAATGC CGATGCACTG
CTCCTGCTGC GCGTTAGCGC CGAAGAGCCG CTGCAGGTGC TGCAGCTTCC CAGCGAGATC
GCCGTGCAAT TGCCAGGAAG CGACTCACCG ACCAGTTTGT CCAGCCTTTG GCAACGCGGT
GGGGTGGCGT TGTTGAACGA TGCTATTCAA GACATTCTTG GGTCAACGCA ACAGGTACCT
CAGCGGTATG TCGTGATGCC TCGCTCAGCA TTACGCAGCC TTGTGGATGG TCTGGGTGAT
GTGGATTTAG TTCTCGATCA GACCTATCAG CACAACGACC AGTCTCAGGG TTACAGCATC
AATCTTCAGG CCGGACGGCA ACGACTGAAT GGGGAGAAGG CAGAACAATT CGCCCGTTAC
CGACCAACTC CTCTGGATAA CGCCAACCGA CGAAACCGAC AGCAGGATTT GATCTTGGCC
TTGGTTGATC AGGTGAAGGA TTCGAGTGTG ATCTCAACGC TGCCGTTGCT GGTGAGCCGG
TTGGACGATG AGTTGGATAC CAATCTCAGC CGTCGTGAGC AATTGAGTTT GGCGGCGGCT
TTGATCGCGA GTCCGCTACC GGTTCGCATC ACCCAGGTGC CCCTGGCCGA GCGTATGGAC
AATCAGATTT TGCGACAAGT TAAGCCTGAT CAGACGTTGC CCCTGTGGCC ACAGGACTGA
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| Protein sequence | MTSSKETRLT RWFGRRPLRT VLRLGAIALG VGATGWLLSV LWPEPDRAAK EASTKSEAMT
NLAPFPSAPV MVLVVGIDAN QLGESSNQAA PLGRANADAL LLLRVSAEEP LQVLQLPSEI
AVQLPGSDSP TSLSSLWQRG GVALLNDAIQ DILGSTQQVP QRYVVMPRSA LRSLVDGLGD
VDLVLDQTYQ HNDQSQGYSI NLQAGRQRLN GEKAEQFARY RPTPLDNANR RNRQQDLILA
LVDQVKDSSV ISTLPLLVSR LDDELDTNLS RREQLSLAAA LIASPLPVRI TQVPLAERMD
NQILRQVKPD QTLPLWPQD
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