Gene Syncc9902_1365 details

Gene Information

• Locus tag: Syncc9902_1365
• ID: 3742869
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Synechococcus sp. CC9902
• Kingdom: Bacteria
• Replicon accession: NC_007513
• Strand: +
• Start bp: 1321609
• End bp: 1322304
• Gene Length: 696 bp
• Protein Length: 231 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 637771549
• Product: ATPase
• Protein accession: YP_377373
• Protein GI: 78184938
• COG category: [P] Inorganic ion transport and metabolism
• COG ID: [COG1121] ABC-type Mn/Zn transport systems, ATPase component

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 0.90263
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCGCCC TTGCCAACAA TGAAGGGTTA CGCGCGTCAC GCGTCTGCTT TAGCTACGGC 
GATAGGCAGA TCATTGACAA CATCACCCTT GAACTCAAGC CCGGAACTCT CACGGCACTC 
GTGGGGCCAA ATGGGGCTGG CAAATCAACC CTGCTGCACC TCTTACAAGG GCGATTGCAA 
AGAGATAGCG GACACGTGGA ATGCAACAGC AGTATTACCG TCATGCCGCA AAGAGCCTCC 
ATTGATTGGA CGTTTCCAAT CACCGTCAAT GAGATGGTGC GTTTAGGCGG AAGAAATCAC 
TCCCATCAAC CAGGAGGGTT ATTAGCGAAA CAACTCCTAA GGCGAGTGGG CATGGAAAGG 
TTGGCTCACA GACGACTCAG TGACTTATCT GGAGGACAAC AACAACGCGT TTTACTAGCA 
AGAGCCTTGA TGCAACAAAC CGGAGTCATC CTCCTCGATG AGCCGTGTAG CGCAATCGAT 
CCGCCAACTC GTGAACATCT CCTGTCCGTC ATGCGAGAAC AAGCTGATGC AGGGCAAACA 
TTGTTGATCA GCAGCCACGA CTGGGGAAGT GCTCTCGATA GCTATGACAA AGTTCTGGTG 
CTTGACACAA AATTATTAGC TGATGGAACG CCATCAGAAG TCCGCGAGAA ACTAAGTGAT 
ATGACATGCA TGATGGGGAG CCATTGCTGT GGATGA 

 

Protein sequence

MSALANNEGL RASRVCFSYG DRQIIDNITL ELKPGTLTAL VGPNGAGKST LLHLLQGRLQ 
RDSGHVECNS SITVMPQRAS IDWTFPITVN EMVRLGGRNH SHQPGGLLAK QLLRRVGMER 
LAHRRLSDLS GGQQQRVLLA RALMQQTGVI LLDEPCSAID PPTREHLLSV MREQADAGQT 
LLISSHDWGS ALDSYDKVLV LDTKLLADGT PSEVREKLSD MTCMMGSHCC G