Gene Syncc9902_1359 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_1359 
Symbol 
ID3742088 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp1315733 
End bp1316704 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content59% 
IMG OID637771543 
Productpermease 
Protein accessionYP_377367 
Protein GI78184932 
COG category[R] General function prediction only 
COG ID[COG0701] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTTGCCGC AGAGCTTGGA GAAACTCTCC ACCGCCTGGG CGATCTTCCA GGGCCTCCTG 
CTGGAAGCCA TTCCCTTCCT CTTGCTGGGA GTTGCGATTG CAGGGCTGGC GCGCTGGCTC
GTTCCCCAGA CCGCTTGGGT CCAACGGCTT CCCAAAAATC CACTGATAGC TCCAATCACA
GGGGCCTTGA TGGGATTCGC CTTACCGGCC TGCGAATGCG GAAACGTTCC AGTTGCCAGA
AGGCTCCTGG CCAGCGGTGC TCCCATGGGT ACAGCTTTTG GCTTCCTGTT TGCAGCGCCG
GTTCTCAACC CAATTGTCTT GGCGAGCACC TGGGCTGCTT TCCCCGATCA ACCCTGGCTG
TTGATTGCAC GGCCACTGGG GGCCTTTGTG ATTGCCGTTT TGCTGAGCTT GCTGCTGGTT
CAGCTGCCGG AAACCCAATT GCTGGAATCC GCCTTACTCA GCGAACGAAG GATGAGCCAA
CCCCTAAGCA AGATTGGGCT GCTGGAACGC AGTGGCGGTT TAATTGGTGA TCCCATCGGG
GAAATTGCAC CAGCAGAGCC CACTCGTCCC AGAGCCATGG ACGTGCTGGA CCAGAGCAGT
CGGGAATTTT TGGATCTTTT GGCTCTGCTG GTGCTGGGAT GCCTGATCGC TGCCCTTGTT
CAAACCTGGC TACCGCGCAG TTGGTTGCTG GCCGTGGGTG GTGCCCCAAC GGGATCAATT
TTGGCGTTGA TGCTGTTGGC CGTGGTGGTG TCGGTGTGCT CCAGCGTCGA TGCCTTTTTA
GCGTTGGGAT TTGCAGCGCA GGTCACCCCC GGTGCACTGC TGGCGTTCCT GCTTCTTGGG
CCAGTGGTCG ACCTAAAACT GGCCGGACTG TTCACTGTTT TGATGCGTCC GCGCGCCATT
GCGATCACGG CCATGGCCGC CAGCCTTGGC GTGCTCCTGA TCGGCCAATG GGTCAATCTC
TGGCGGCTGT GA
 
Protein sequence
MLPQSLEKLS TAWAIFQGLL LEAIPFLLLG VAIAGLARWL VPQTAWVQRL PKNPLIAPIT 
GALMGFALPA CECGNVPVAR RLLASGAPMG TAFGFLFAAP VLNPIVLAST WAAFPDQPWL
LIARPLGAFV IAVLLSLLLV QLPETQLLES ALLSERRMSQ PLSKIGLLER SGGLIGDPIG
EIAPAEPTRP RAMDVLDQSS REFLDLLALL VLGCLIAALV QTWLPRSWLL AVGGAPTGSI
LALMLLAVVV SVCSSVDAFL ALGFAAQVTP GALLAFLLLG PVVDLKLAGL FTVLMRPRAI
AITAMAASLG VLLIGQWVNL WRL