Gene Syncc9902_1340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_1340 
Symbol 
ID3743164 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp1298013 
End bp1299158 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content59% 
IMG OID637771523 
Producthypothetical protein 
Protein accessionYP_377348 
Protein GI78184913 
COG category[C] Energy production and conversion 
COG ID[COG0644] Dehydrogenases (flavoproteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGAACA GTTGGGACGT CATTGTGATT GGGGCAGGAG TTGCCGGTGG CTTGGCTGCC 
TTTGATTGCG CACGTCGAGG CTTGAGAGTT CTGCTCGTTG AGAAACGCTC CTTCCCCCGC
TGGAAGGTCT GTGGTTGCTG CTTTAACGCC AATGCCTTAG CAGCACTCAC AGCCTCAGGC
CTCCCGAACG TCTTTCGTGA TCAAGGTGCT GTGCCCCTCG ATCAACTTCG TCTTGGTTGG
AGTGGTAAGT CGCTCAACCT TGAGTTGCCG GGCGGTTGGG CACTCTCGAG GGAGCGCTTC
GATCAGGCTT TGGTCGACGC GGCTGAGGCT GCTGGTGCAT CAGTGCGCTT TCAAACCAGT
GCAGTGCTCG AGGAGATCAC TCCCGGTGGG CGAATGGTGC GATTACGGCC GCCGGGTGAT
GCACCCGTTA AACGAATCAG GGCCCGTGTC GTTCTCGTTG CGGCCGGTCT GCAACACCAA
GTGATGTCTC CAACTCATGC GGCCAGCTCA AGGAGCACGC CGCAATCGAG GCTTGGGGCA
GGCTGCCTTA TCGATGATGA CAACGGCTCT TATGCGTCTG GGGCGATTCA CATGGCCATT
GGCCAGCGTG GCTATGTCGG ATTGGTTCGA CGTGAGGATG GTGCTCTCAA CCTGGCTGCT
GCTTTCGACC GCGCTGTGGT CAAGTCGTCT GGCGGTGTGA CTCGGGCGGC AGAAGAGGTT
CTTAGTCAAG CCGGCTTCCC CTTGCCGCGA AGTTTGGAGT CGTCTCGTTG GCAATTAACT
CCTGCACTCA CCCGTCGGGC TGGTTTGTTC GCAGGAGATC GCTTTTTGTT GCTTGGCGAC
GCGACCGGTT ACGTGGAGCC GTTCACCGGT GAGGGCATGG CCTGGGCTCT TGCTGCTGGG
GCGGCGGTTG CTCCATTTGT GGAGGAGGCT CAGGGGGAAT GGTCAGCGGA TCTCGAGCGG
CGCTGGCAAA GGCGGTTGGT GGATCTGACG ATCAGCCGTC AACGTGTTTG CAGTGTGTTG
TCGACGTTGT TACGACAACC GCTCACGACA AATGCGTTGT TCAGCATCGG GTGCCAATGG
CCTTCCATTC CGCAGCGCGT GATTAGCAGT CTCAATCAGG TGTCCCCCCT GATGGCGAGC
TCCTAA
 
Protein sequence
MQNSWDVIVI GAGVAGGLAA FDCARRGLRV LLVEKRSFPR WKVCGCCFNA NALAALTASG 
LPNVFRDQGA VPLDQLRLGW SGKSLNLELP GGWALSRERF DQALVDAAEA AGASVRFQTS
AVLEEITPGG RMVRLRPPGD APVKRIRARV VLVAAGLQHQ VMSPTHAASS RSTPQSRLGA
GCLIDDDNGS YASGAIHMAI GQRGYVGLVR REDGALNLAA AFDRAVVKSS GGVTRAAEEV
LSQAGFPLPR SLESSRWQLT PALTRRAGLF AGDRFLLLGD ATGYVEPFTG EGMAWALAAG
AAVAPFVEEA QGEWSADLER RWQRRLVDLT ISRQRVCSVL STLLRQPLTT NALFSIGCQW
PSIPQRVISS LNQVSPLMAS S