| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_1335 |
|---|
| Symbol | |
|---|
| ID | 3743159 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus sp. CC9902 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007513 |
|---|
| Strand | + |
|---|
| Start bp | 1293784 |
|---|
| End bp | 1294437 |
|---|
| Gene Length | 654 bp |
|---|
| Protein Length | 217 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637771518 |
|---|
| Product | peptidase S26A, signal peptidase I |
|---|
| Protein accession | YP_377343 |
|---|
| Protein GI | 78184908 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0681] Signal peptidase I |
|---|
| TIGRFAM ID | [TIGR02227] signal peptidase I, bacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0446505 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGGTTG TCGCGGGCAA TCGACAGGGG AACAGGCCAA GCTTGTGTGA TCTTCGGTCA
ACGATGACCA ATCCCACGCC TCCTTCCAAC ACTGATCAGA ACAAAGGCTT CTGGCGCAGC
TTGATTCTCT GGGCCGTGCT TGCCCTGTTG TTGCGGTGGT ATGTGCTCGA ACCGCGCTGG
ATTCCATCCG GATCGATGTT GCCCACGCTG CAGTTGCAAG ATCGAATCCT GGTGGAGAAA
GTGCGTCCAC GCGTTCAGCG GATTCAACAC AGACACCTGC ATCGCAATGA TGTGGTGGTG
TTCGAACCGC CCGAGGCCTT GATTGCTTCG GGCTACGACG CCAATGCGGC TTTGATCAAG
CGCTTGGTAG GCCTCCCCGG AGATGTCGTG GCCGTTGAGG GGGGCGTGCT GATCCGCAAT
GGAGAGCCCG TCAATGAACC CTGGCTGTCG GAAAACATGG ATTACGCCAT GGCAGCCATC
ACCGTCCCTG AAGATCAGCT CTGGGTCATG GGCGACAACC GAAATGCCAG CCTTGATTCC
CATCTGTGGG GAACGCTGCC GGAACAGAAC GTGATCGGCA CCGCGATTTG GCGGTACTGG
CCACTTAGAC GGTTCGGTCC GATACGGTTC TCCGCCACCT CAGATCGCGG TTGA
|
|---|
| Protein sequence | MEVVAGNRQG NRPSLCDLRS TMTNPTPPSN TDQNKGFWRS LILWAVLALL LRWYVLEPRW
IPSGSMLPTL QLQDRILVEK VRPRVQRIQH RHLHRNDVVV FEPPEALIAS GYDANAALIK
RLVGLPGDVV AVEGGVLIRN GEPVNEPWLS ENMDYAMAAI TVPEDQLWVM GDNRNASLDS
HLWGTLPEQN VIGTAIWRYW PLRRFGPIRF SATSDRG
|
|---|
| |