Gene Syncc9902_1322 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_1322 
Symbol 
ID3743224 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp1278911 
End bp1280005 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content61% 
IMG OID637771505 
ProductN-acetylmuramoyl-L-alanine amidase 
Protein accessionYP_377330 
Protein GI78184895 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0860] N-acetylmuramoyl-L-alanine amidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.779123 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTGCGG CGCGTTCACG CCGAATGGCC TGGCTGCTTG CTGCCGTGTT GCAGTGTCCA 
GGCCTATTGG CTGCCATGCC CGCTCAGGCG GCGAGTGCAC TGGCGGCTTG GGCGATGACG
GATCAAGGCG TCTTGCAGCT GCGTACGAGT CGTAATGCCC AGCTCAAAGC CTTTTTTCAG
GCCGCAGGTG ATGGCCGTGG AACCCGGGTC TGGATCGACT TCCCCGGTGA ATTGCGCTTT
CCCCGCCGTC TGGCTGGCAG GGGGGCGGTG AAGGAAATCC GCATCGGTAA GCCGCGGACT
GGGGCAACCC GGCTCGTGGT GGAGTTTCGC TCCGATGTGG ATCTGAATCC AGAGGATTTG
CGGCTTCGGG GGACGGCACC GGATCGATGG GAAATGGCCT TTGTTGGCTT ACCCATCCGG
GGGCTTAACG ACATGGGAGA AGGAGATCTC ACGGGACGGG CGACGGCCTG GCAAACCTCC
CCCCGGTTCG CACCATCGCG AACCCCCGTC GACCCCTCGG GCCTTCCAAC CGTTCCAAAA
AATCGCTATC GGGTCGTGAT CGATCCCGGC CATGGCGGCC CTGATCCTGG GGCTATCGGA
ATTCGTGGGC TTCGCGAATC CGATGTGGTG CTGGATGTAT CGCTGCAGGT TGCCGCTTTG
CTGAGGGCCC GAGGTGTGGA TGTTCGGCTC ACGCGCACCA GTGAGATCGA TGTGGATTTA
CCGCCGCGGG TGTCCTTGGC CAATCGATTC GGGGCCACAG CTTTCATCAG CATTCATGCC
AATGCCTTGA GCATGAGACG GCCGGATGTG AATGGGATTG AAACCTTCTA CTTCTCGGAT
CCACGCTCGG GACGTCTGGC GACCTACCTG CAGCAACAAA TGATGGATGT GTCGCCGGGC
ACCCCCAATC GCGGCGTACG GCGGGGCCGA TTTTTTGTGA TTCGTCGAAC CACCATGCCG
TCGGCCTTGG TGGAAATGGG ATTTGTCACC GGGGCCATTG ATTCACCGCG TCTCGCCCTC
GCCGATCATC GTCGCCGCTT GGCCTTAGCG ATTGCGGCGG GCACCTTGAA CTATCTCAAG
CAGGAGGTGC GATGA
 
Protein sequence
MVAARSRRMA WLLAAVLQCP GLLAAMPAQA ASALAAWAMT DQGVLQLRTS RNAQLKAFFQ 
AAGDGRGTRV WIDFPGELRF PRRLAGRGAV KEIRIGKPRT GATRLVVEFR SDVDLNPEDL
RLRGTAPDRW EMAFVGLPIR GLNDMGEGDL TGRATAWQTS PRFAPSRTPV DPSGLPTVPK
NRYRVVIDPG HGGPDPGAIG IRGLRESDVV LDVSLQVAAL LRARGVDVRL TRTSEIDVDL
PPRVSLANRF GATAFISIHA NALSMRRPDV NGIETFYFSD PRSGRLATYL QQQMMDVSPG
TPNRGVRRGR FFVIRRTTMP SALVEMGFVT GAIDSPRLAL ADHRRRLALA IAAGTLNYLK
QEVR