Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9902_1302 |
Symbol | gatA |
ID | 3742383 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9902 |
Kingdom | Bacteria |
Replicon accession | NC_007513 |
Strand | - |
Start bp | 1260091 |
End bp | 1261566 |
Gene Length | 1476 bp |
Protein Length | 491 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637771485 |
Product | aspartyl/glutamyl-tRNA amidotransferase subunit A |
Protein accession | YP_377310 |
Protein GI | 78184875 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
TIGRFAM ID | [TIGR00132] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.584243 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATCGCA AGACCATGAC GATCAGCGCG TGGCGTCAGC AACTGCAGAA CGGTGATATT TCATCCCGTG AGCTTGTTGA TCAGCACATC GAAAGGCTGG AAACTGCTGA ACCGTCCCTC AGTGTTTACA ACGAGATCAC GGTTGAGCGA GCTCGGGCCG ATGCGGATCG CATCGATGCT GCCCGTGCTG CCGGTGAATC GCTGGGTCCA CTAGCCGGCT TGCCGCTGGC GATCAAGGAC AACCTCTGCA CGCGAGGTGT GCGAACCACC TGTTCAAGCC GAATGCTTGA ACATTTCGTT CCGCCCTATG AGTCCACCGC TACGGAGCGT CTGTGGCAGG CCGGAGGGGT TCTGGTTGGT AAAACCAACC TCGATGAATT CGCGATGGGT GGCTCGACTG AAACCTCGGC GTTTGGTGCA ACGCACAACC CTTGGAATCT CGACCACGTC CCAGGCGGTA GCTCTGGTGG CAGTGCGGCG GCGGTTGCCT CCGGCAGTTG TATTGCATCG CTGGGTTCTG ATACCGGCGG ATCGATCCGT CAGCCAGCGT CCTTCTGCGG TGTTGTTGGC TTGAAACCCA CCTATGGCCG GGTGAGTCGT TGGGGCCTGG TGGCGTTTGC GAGCTCCCTC GATCAAGTGG GTCCTTTTGC AACCTCCGTG GCCGATGCGG CTGAGCTGTT ACAGGTGATT GCTGGGCCCG ATCCGCGCGA TTCAACCTGT CTGAACGTTG AGGTTCCCGA CTATTCAGCC GGTCTGAACC AGTCGATCAA GGGGCTGAAG GTAGGGGTGA TCAAGGAATG CTTTGACGCC AAGGGGCTGG ATGGCGAAGT CAACGCATCT GTGCGGGCCG CAGCCGCGCA GCTTGAGGCC CTTGGCGCTG AATTGGTTGA GGTGAGTTGC CCTCGGTTTA ACGACGGCAT CGCCACGTAT TACGTGATCG CTCCTTCAGA GGCATCGGCC AATTTGGCTC GTTACGACGG CGTGAAGTAC GGCTTCCGGG CTGCGGATGC GGAGAGTTTG GCAACGATGA CGTCGAGCAG TCGGGCTGAA GGCTTTGGTG AAGAGGTCCA ACGGCGGATC TTGATCGGTA CCTATGCCCT GTCCGCTGGA TATGTCGATG CGTACTACAA GAAAGCCCAG CAGGTGCGCA CGTTGATCCG CCGCGATTTT GATGCCGCGT TCCAATCGGT TGATGTGCTG CTCACCCCTA CGGCGCCCTC TCCCGCCTTC AAGGCTGGGG CCCACAAAGA TGATCCTTTG GCGATGTATC TGGCGGATCT CCTAACGATC CCAGTCAATT TGGCTGGTTT GCCTGCGATC AGTGTTCCCT GCGGTTTTAG TCAAACGGGG CTGCCCATCG GTGTGCAGTT GATTGGCAAT GTGCTCGATG AGGCGCGTTT GCTCCAGGTT GCCCACCAAT ACGAACAAGC GGCTGATGTG TTGTCCCAAC GCCCGAAGGC ACCATTGGTG CCTTAA
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Protein sequence | MDRKTMTISA WRQQLQNGDI SSRELVDQHI ERLETAEPSL SVYNEITVER ARADADRIDA ARAAGESLGP LAGLPLAIKD NLCTRGVRTT CSSRMLEHFV PPYESTATER LWQAGGVLVG KTNLDEFAMG GSTETSAFGA THNPWNLDHV PGGSSGGSAA AVASGSCIAS LGSDTGGSIR QPASFCGVVG LKPTYGRVSR WGLVAFASSL DQVGPFATSV ADAAELLQVI AGPDPRDSTC LNVEVPDYSA GLNQSIKGLK VGVIKECFDA KGLDGEVNAS VRAAAAQLEA LGAELVEVSC PRFNDGIATY YVIAPSEASA NLARYDGVKY GFRAADAESL ATMTSSSRAE GFGEEVQRRI LIGTYALSAG YVDAYYKKAQ QVRTLIRRDF DAAFQSVDVL LTPTAPSPAF KAGAHKDDPL AMYLADLLTI PVNLAGLPAI SVPCGFSQTG LPIGVQLIGN VLDEARLLQV AHQYEQAADV LSQRPKAPLV P
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