Gene Syncc9902_1295 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_1295 
SymboldnaG 
ID3742376 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp1251172 
End bp1253232 
Gene Length2061 bp 
Protein Length686 aa 
Translation table11 
GC content58% 
IMG OID637771477 
ProductDNA primase 
Protein accessionYP_377303 
Protein GI78184868 
COG category[L] Replication, recombination and repair 
COG ID[COG0358] DNA primase (bacterial type) 
TIGRFAM ID[TIGR01391] DNA primase, catalytic core 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.830099 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCAACG CCCGCTTACA TCCACGAACG ATCGAGGCCG TGAAGGAGCG GGCCGACATC 
GTTGACGTGG TTGGTGAGCA CGTTGTTCTG AAGAAAAAGG GACGCGAGTT CGTCGGCATC
TGCCCTTTCC ATGACGACAG CAAACCGTCG ATGACGGTGT CTCCCGCTAA ACAGTTCTAC
TACTGCTTCT CCTGCGGGGC CGGGGGTAAC TCCATCAAGT TTTTGATGGA GTTTCAGCGT
CAGAGCTTCA GCGATGTGGT GCTGGATCTG GCGCGCCGCT ACCAGCTACC GATTGAGACG
GTTGATGGCC CGCAGCAGGA GCGATTACGC CAACAGCTCT CGCGTCGCGA CAAGCTCCAA
CGCGCTTTGG CCCTCGCCTC TGGCTGGTTT CGTAGTCAGT TGCGGAGTCC GGCTGGTCAG
GAGGCGCTCA ACTACCTCAC CGAACAACGT GGACTGAGTC CGGCCGTTCA GGACGCGTTC
GAGCTGGGTT ACGCCCCTGA TCAATGGGAT GGCCTGCTGA AGCATCTGCA GCAGGTGGAG
GGACTGGCTC CGGAATTGCT CGAATCTGCT GGATTGGTGG TTCCTCGTAA GGGAGGTAAT
GGGTTCTATG ACCGTTTTCG TCATCGCGTC ATCGTGCCGA TTCACGACCG TCAGGGGCGT
GTGATCGGTT TTGGCGGTCG CAGCCTCGAT GGCAGCGAGC CGAAGTATCT CAACTCCCCA
GAAACAGAGG TGTTTGAGAA GGGAAAACAC CTCTTTGGCC TTGATAAGGC ATCCAATGCC
ATCCGAAAGG ATGACCGCGC CGTAGTTGTT GAAGGGTATT TCGATGTCAT CGCCCTTCAC
GCTGCCGGAA TCACCAATGC GGTGGCGTCT CTCGGGACGG CCCTCAGCAG TCAACAAATC
ACCCAGCTGT GTCGCGTTAC CGACAGCAAG CGCATCGTGC TCAATTTCGA TGCTGATGGT
GCTGGGGTTC GTGCGGCGAA TCGAGCGATC GGTGAGGTGG AGCAACTCTC GCTTCAGGGC
CAATTGGAGC TGCGGGTTCT CCACTTGCCC ACGGGTAAGG ATCCTGATGA GTTCCTCAAA
GACCACGGCG CTGGCGATTA CCGGGCGCTG TTGGATCAGG CACCGCTCTG GCTCGACTGG
CAGATCGAGC AGGCCCTGGC TGATCGCGAT CTGAGTCGTG CTGATCAATT TCAGCAAGCG
GTCAGTTCGC TGGTGGCGTT GTTGGGGAAA CTGCCTCAGT CGGCTGTGCG CACGCATTAC
CTCCAGCGGG TGGCTGAGCG GCTGAGCGGA GGTCAGGGAC GCCTTGCCTT GCAGCTCGAG
GAAGACCTGC GTCAACAAGT GAAGGGTCAG CGTTGGCATG GTCGATCCAG TCGTCATGAG
CAGCCCGGTG AGATCAGCCA GCGGGAGCGG TCCGAAGCCG ATCTTCTGCG GTTGTACCTG
CACTGCCCTC GCCATCGGGC TGTGATTCGT CAGGAGTTGC GTCAGCGGGA GCTGGAGGAT
TTCGCCATCC AGCACCATCG CCATCTTTGG GCTGCCATTA CGGAACTCGA GGAAACGAAT
CTGGGGGTGG GTCGATTGGA GGCGATTAGC CGTCGTGATG ATGCCGGAGA TGGTTTGGAT
GACCTGGATC TACCCCGTTT GTTGACCGAT CAACTCCTGC TGGAAAACAG TGCTTTGGTC
TCGCGTCTCA CACCCTTGCT GGAACCGGGA GAGCTCCAAC GGGTGTCGTT AGCCGAGCCG
CTGGAGCTCT TGCGTGGCAC AGCAGCGCTG TTGGAGCGTC AGAAAAGTTT GAAGCGCTGC
CGCCATCTCT TGGAGGCATG GGGTGGGCAG CGGCTGCAAA CGTTGGAGTC TTGTATCGCT
GTGCTGATCG ATCAGATTCA GCAGACCACA GAACCCCACG ACACGACGGA TATGGAGATG
CGAATCCAGG CGTTATTCGA TGATTTGAAT CGTGATGCTC TGCGTTATCA AGAGCTTTAT
TACACCGAGC GTAAGCATAT TTCTCATCTG GATGAGCAGC GTTGTGCGGG CTACTCCGCG
GGTGAGCAGC TGCCGGCCTG A
 
Protein sequence
MVNARLHPRT IEAVKERADI VDVVGEHVVL KKKGREFVGI CPFHDDSKPS MTVSPAKQFY 
YCFSCGAGGN SIKFLMEFQR QSFSDVVLDL ARRYQLPIET VDGPQQERLR QQLSRRDKLQ
RALALASGWF RSQLRSPAGQ EALNYLTEQR GLSPAVQDAF ELGYAPDQWD GLLKHLQQVE
GLAPELLESA GLVVPRKGGN GFYDRFRHRV IVPIHDRQGR VIGFGGRSLD GSEPKYLNSP
ETEVFEKGKH LFGLDKASNA IRKDDRAVVV EGYFDVIALH AAGITNAVAS LGTALSSQQI
TQLCRVTDSK RIVLNFDADG AGVRAANRAI GEVEQLSLQG QLELRVLHLP TGKDPDEFLK
DHGAGDYRAL LDQAPLWLDW QIEQALADRD LSRADQFQQA VSSLVALLGK LPQSAVRTHY
LQRVAERLSG GQGRLALQLE EDLRQQVKGQ RWHGRSSRHE QPGEISQRER SEADLLRLYL
HCPRHRAVIR QELRQRELED FAIQHHRHLW AAITELEETN LGVGRLEAIS RRDDAGDGLD
DLDLPRLLTD QLLLENSALV SRLTPLLEPG ELQRVSLAEP LELLRGTAAL LERQKSLKRC
RHLLEAWGGQ RLQTLESCIA VLIDQIQQTT EPHDTTDMEM RIQALFDDLN RDALRYQELY
YTERKHISHL DEQRCAGYSA GEQLPA