Gene Syncc9902_1292 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_1292 
Symbol 
ID3742373 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp1248312 
End bp1249586 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content59% 
IMG OID637771474 
ProductDNA-directed DNA polymerase 
Protein accessionYP_377300 
Protein GI78184865 
COG category[L] Replication, recombination and repair 
COG ID[COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.355097 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTCAGG TCACCGCCCT CATTGACGGG AACAATTTCT ATGCCTCCTG CGAACAGAGC 
CTGGACCCAG CCCTGATTGG TCGGCCGGTG GTGGTGCTTT CCAATAACGA CGGTTGCATC
GTGGCTCGAA GTGCCGAAGC GCGGGAACTT GGCATCGCCA TGGGGACCCC ATATTTCAAA
GCCAGGCGCG AGCTAGCCCG CCAAAACGTT GTGGTGCGGA GCTCGAACTA TGCGCTCTAC
GCCGATATGA GCCAACGGAT GATGAGCCTG CTGGAAGCCC ATTGCGACGA CGTTGAGATC
TATTCCATCG ATGAAGCCTT TGGACGCCTA AGGCGGCCCA ACAATGGAGA GCTCATTCCC
TGGGCGCGCC AGCTTCGCGC ACGGGTACGC CAAAACCTGG GACTCCCCAT TGCGATCGGA
TTGGGCGCGA GCAAAAGTCA AGCCAAACTG GCCAACCGCC TGGCAAAAGC GGTCCCCAAT
CATGCGGGGG TCTTCGATTT CGGGACTTGC CACAACCCAG ATCAATGGCT GGAAACGATT
GCGATCGAAG ACGTTTGGGG GATCGGCCGG CAATTGGCGG CGTGGTGCCA GCGGAGAGGA
ATCAGCAACG CACGCCAACT GAGGGATATG CCCCAAGGAG AGCTCAAAGC GAAATGTGGC
GTGGTGGGAT TACGACTGCA ATGGGAACTG CGGGGATATG CCTGCCTGCC CATGGATTTG
GCACCCGCAG CCAAACAAGA AACATGCGTG AGCCGTAGCT TCAGCCAACC GGTGACCACC
CGCGAAGAGC TGCGCCAGTC GATCGCGACG TATGTGGTGC GCGCAGCCGA AAAATTGCGT
AAGCAACAGC AACGCACATC GGCCCTCACG ATCTACACCC GCACAAGTCC CTTCAAGCCC
AACTTTTACA GCCGTGCTGC CAGTCGCCAA TTGGATGTAC CCAGCAACGA CACCGCCGTT
CTGCTCCAAG CGGCGCTGCC CCTGGTCGAC CACATCTTTC GTCCGCACCG TCCCCTCGCC
AAAGCGGGGG TGTTGATGCA ACACCTCCAG GGCATCGACA CCCTTCAATC CCACTTGTTG
GTACCGATGA GTGCCGAGCA ACAAGACAAA CGGGAGAGCC TGATGCAAAC CATCGACCAA
CTCAACCGAC GCTATGGGCG AGGCTCCGTG CACTGGGCCG CCTGTGGGCT GGAACCTGGA
TGGGCCATGC GTCGCGACCA ATTGAGTCGT GCCGCGACAA CCCGTTTGAG GGATATTCCT
GTGGTCCGGG CTTAA
 
Protein sequence
MAQVTALIDG NNFYASCEQS LDPALIGRPV VVLSNNDGCI VARSAEAREL GIAMGTPYFK 
ARRELARQNV VVRSSNYALY ADMSQRMMSL LEAHCDDVEI YSIDEAFGRL RRPNNGELIP
WARQLRARVR QNLGLPIAIG LGASKSQAKL ANRLAKAVPN HAGVFDFGTC HNPDQWLETI
AIEDVWGIGR QLAAWCQRRG ISNARQLRDM PQGELKAKCG VVGLRLQWEL RGYACLPMDL
APAAKQETCV SRSFSQPVTT REELRQSIAT YVVRAAEKLR KQQQRTSALT IYTRTSPFKP
NFYSRAASRQ LDVPSNDTAV LLQAALPLVD HIFRPHRPLA KAGVLMQHLQ GIDTLQSHLL
VPMSAEQQDK RESLMQTIDQ LNRRYGRGSV HWAACGLEPG WAMRRDQLSR AATTRLRDIP
VVRA