Gene Syncc9902_1287 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_1287 
Symbol 
ID3742368 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp1245494 
End bp1245928 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content55% 
IMG OID637771469 
Producthypothetical protein 
Protein accessionYP_377295 
Protein GI78184860 
COG category[S] Function unknown 
COG ID[COG1576] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00246] rRNA large subunit m3Psi methyltransferase RlmH 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAATCCCT CACGCTGTCG GATTTTGGCG GTGGGCAAAG TTCGCCGCGA TTGGATTCAA 
AAGGGAATTG AGTTGTATCT GAAGCGCCTC CCAGGCCTCA CCGTGACGGA ACTACGGGAC
AGTTCCCCCG AAAAAGAAGC CGACAGCATT CGTGCCGCCC TACGTCCTGA TGAGACCTTG
ATTGCCCTGA TGGAACAAGG GGAGTGCTTG GGATCGATTC CCTTTGCCAG GCGGTTGAAG
CAGTTCGAGA ACGAACGACT TGTTTTTGTG ATTGGTGGTG CCGATGGACT CACCGCTGAG
CTCAAGTTGC AGGCGCAATG GCAACTGAGC TTGTCGCCAC TGACCTTTCC CCATGAACTG
GCTCGACTGA TGCTGGTTGA GCAACTGTTT CGTGCCCAGT CCATCGTGCA AGGACGTCCC
TACCACCGCG CTTAA
 
Protein sequence
MNPSRCRILA VGKVRRDWIQ KGIELYLKRL PGLTVTELRD SSPEKEADSI RAALRPDETL 
IALMEQGECL GSIPFARRLK QFENERLVFV IGGADGLTAE LKLQAQWQLS LSPLTFPHEL
ARLMLVEQLF RAQSIVQGRP YHRA