Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9902_1283 |
Symbol | ksgA |
ID | 3743302 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9902 |
Kingdom | Bacteria |
Replicon accession | NC_007513 |
Strand | - |
Start bp | 1243181 |
End bp | 1244005 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637771464 |
Product | dimethyladenosine transferase |
Protein accession | YP_377291 |
Protein GI | 78184856 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0030] Dimethyladenosine transferase (rRNA methylation) |
TIGRFAM ID | [TIGR00755] dimethyladenosine transferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCCTTTT CAGGCCATAC CGCCCGTAAG CGTTTTGGTC AGCACTGGCT GCGTGATGCG CGGGTGCTGG ATCAGATCGT TGAGGCCGCC CGTCTGCAGC AAGACGACTG CGTGTTGGAG GTCGGTCCCG GTCGTGGTGC TTTGACGGAG CGTTTACTGG CCTCACCGGC GGCCCAAATC CATGCGATCG AATTGGACCG CGACTTGGTG CGGGGTTTGC ACGATCGTTT TGGATCCGAG AGCAGGTTCA GCCTTCGCGA GGGCGATGTC TTGGAGGCGC CGCTCCACCT GGTCGATGGC GGATTTGCCA ACAAAGTTGT TGCCAATATT CCGTACAACA TCACGGGTCC ATTGCTGGCG CGACTGATCG GCCGCCTCGA TCGTCCAGTC GAGCCCACCT ATGACTGTCT GGTGCTGCTT CTACAAAAAG AAGTGGCCGA ACGGATTCGC GCCAAGCCCG GGCGGAGCAG CTTCAGTGCT TTGAGTGTTC GCATGCAGCT TTTGGCGGAT TGTTCCTTGG TCTGCCCCGT GCCGCCCCGG TGTTTTCAAC CACCACCGAA GGTGCAGTCG GAAGTCATCC TGCTCAAGCC ATTTCCCCCA GAGAGGCGCC TGCCCATCGA CCTTGCGAGT CGCGTCGAAG CATTGCTGAA GCAGGCCTTT CAGGCGAGGC GGAAGATGTT GCGCAACACC CTGGCCGGTG TAATCGACCC TCAGGTTTTG GAACCGTTGG CTGCCTCGGT GGGAATCAGC CTGCAACAGC GTCCCCAAGA GGTGGCTGCT GAGGCCTGGG TTGCCCTCGC TAGGGGTTTG AATCAAGACG TTTGA
|
Protein sequence | MSFSGHTARK RFGQHWLRDA RVLDQIVEAA RLQQDDCVLE VGPGRGALTE RLLASPAAQI HAIELDRDLV RGLHDRFGSE SRFSLREGDV LEAPLHLVDG GFANKVVANI PYNITGPLLA RLIGRLDRPV EPTYDCLVLL LQKEVAERIR AKPGRSSFSA LSVRMQLLAD CSLVCPVPPR CFQPPPKVQS EVILLKPFPP ERRLPIDLAS RVEALLKQAF QARRKMLRNT LAGVIDPQVL EPLAASVGIS LQQRPQEVAA EAWVALARGL NQDV
|
| |