Gene Syncc9902_1272 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_1272 
Symbol 
ID3743291 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp1234265 
End bp1235308 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content55% 
IMG OID637771452 
ProducttRNA 2-selenouridine synthase 
Protein accessionYP_377280 
Protein GI78184845 
COG category[R] General function prediction only 
COG ID[COG2603] Predicted ATPase 
TIGRFAM ID[TIGR03167] tRNA 2-selenouridine synthase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGGCA TGGGAGAAGA CCATTCCACT TCAATCGAAC AGCTGCGGCA ACTCCGTGGC 
CCCCTGATCG ATGTCAGAAG TCCCTCGGAA TTCGACAAGG GGCACTGGCC AGGGGCTGTG
AACCTCCCGT TATTTAGCGA CGACGAACGC GCAGCCATCG GTACCAGCTA CAAGCAAGAC
GGGCGACTGA AAGCCATTCA TCTTGGCCTG AGCGTTACTG GACCGAAAAT GGCGGCCCTA
GCCGAACAAC TCGACCAATA CAGGGGGACT GAGCAGCTGA GGCTGTATTG CTGGAGAGGC
GGGATGCGCT CAGCCAGCAT GGCTTGGCTT GCACAGCAAA TTGACCTCAA CCCTCTGCTA
CTTGAAGGGG GATACAAGGC CTATCGCCAT TGGGCTCAGT CACGTTTCGA TCAAGAATGG
CCCTTAAGGA TCATGGGTGG TCGCACCGGT ACGGGAAAAA CCGATCTGCT GTTGGCTCTG
CAGAACAAAG GCGTTGCCGT TTTAGATCTT GAGGGCCTTG CCAACCATCG AGGTAGCAGT
TTCGGAGGTC TTGGACTGCC AGCTCAACCC AGTACTGAGC ACTACGAAAA TCTTCTCGCT
GAGGTGCTGG ATCAGCATCG ACAACAGGGT GCCGGCTCCA TCTGGCTCGA GGCGGAAAGC
ATTCAAGTGG GACGCTGCCG CATCCCAAAA AGCCTTTTTG ACCAAATGCA AACAGCACCT
GTTCTCGAAA TCCAGCGAAG CCTCGAAGAA CGCGTTGACC AGCTAGTGGA GGTGTATGGA
CAACAGGGCG CCGAAGGGTT GGCGGAAGCC ACCAACAGAA TTAGTCGTCG ATTGGGTCCC
CAACGCACAC AGCAAGCTTT GGAGGCAATC GAAAAACAAG ACTGGGCAAC AGCCTGTCGA
GCCACACTCG ATTATTACGA CCGCTGCTAC GACCATGAAC TGGCACGCTG CCCCGACCGA
AACAGCATTG ATTTGACCGG ACAAACGGCG AAAGTGGCCG CAGAGACGCT GCTTAAAGCC
AAACTTGTGG AACTTTCCGC CTAA
 
Protein sequence
MSGMGEDHST SIEQLRQLRG PLIDVRSPSE FDKGHWPGAV NLPLFSDDER AAIGTSYKQD 
GRLKAIHLGL SVTGPKMAAL AEQLDQYRGT EQLRLYCWRG GMRSASMAWL AQQIDLNPLL
LEGGYKAYRH WAQSRFDQEW PLRIMGGRTG TGKTDLLLAL QNKGVAVLDL EGLANHRGSS
FGGLGLPAQP STEHYENLLA EVLDQHRQQG AGSIWLEAES IQVGRCRIPK SLFDQMQTAP
VLEIQRSLEE RVDQLVEVYG QQGAEGLAEA TNRISRRLGP QRTQQALEAI EKQDWATACR
ATLDYYDRCY DHELARCPDR NSIDLTGQTA KVAAETLLKA KLVELSA