Gene Syncc9902_1271 details

Gene Information

• Locus tag: Syncc9902_1271
• ID: 3743290
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Synechococcus sp. CC9902
• Kingdom: Bacteria
• Replicon accession: NC_007513
• Strand: -
• Start bp: 1233505
• End bp: 1234224
• Gene Length: 720 bp
• Protein Length: 239 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 637771451
• Product: hypothetical protein
• Protein accession: YP_377279
• Protein GI: 78184844

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTTTCCG GTTCTTCCCC CACCACATCC CTCAGCGTTG AAATGCTCAT TGAGCGCTTC 
GCTGCTGGTA ATCCCCGTCA GCGCCGCCCG CTGATCAAGA CGATTGAATC TCGGGTCGAT 
GACCTGGTGA CGCTGGGTGC ATCCGAATTG TTGCCTTTTG ATCCCAAGGG TGACGATTGG 
GCTCCTGGTT GGATCCTTCA GGTCATCCAG CGCCATCACC CCGCCGCCTT AACGGAACTG 
CTGAAGGGTT CCACCGCTGG CTGGTTAAGC GTTGAATCGG CAATCGGTCT CGATTTTGTT 
GCGTTACAAC GCGATCTTTT GAATCAAGAC TTTGAGGCGG CAGATCGTCT GACGAGCAGC 
ATGTTGCGTG AGCTCGCGGG AGATGCAGCG GTTCAGCGTG GTTACGTCTA CTTCAGTGAA 
GTGCCCGCCA TGCAGGGTGT CGATCTCGTC AGCATCGACC GTCTTTGGAC GGTGTATTCC 
CAGGGACGGT TTGGCTTTAC AAGCCAGGCA CGGTTGTTAA CGACTGTGAG TGGTCGTTTT 
GACCAACTTT GGCCGCGTAT TGGCTGGAAA TGCGAGGGAG TATGGACCCG ATATCCAGGT 
TCATTCACCT GGTCGTTAGA GGCACCAGAA GGGCACATGC CTTTGATCAA TCAATTGCGA 
GGTGTGCGTT TGATGGATGC AGTTCTGAAG CACCCGGCCT TAATGGCTCG TCGGGCCTGA 

 

Protein sequence

MLSGSSPTTS LSVEMLIERF AAGNPRQRRP LIKTIESRVD DLVTLGASEL LPFDPKGDDW 
APGWILQVIQ RHHPAALTEL LKGSTAGWLS VESAIGLDFV ALQRDLLNQD FEAADRLTSS 
MLRELAGDAA VQRGYVYFSE VPAMQGVDLV SIDRLWTVYS QGRFGFTSQA RLLTTVSGRF 
DQLWPRIGWK CEGVWTRYPG SFTWSLEAPE GHMPLINQLR GVRLMDAVLK HPALMARRA