Gene Syncc9902_1254 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_1254 
Symbol 
ID3743058 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp1217826 
End bp1219064 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content56% 
IMG OID637771434 
ProductZn-dependent peptidase 
Protein accessionYP_377262 
Protein GI78184827 
COG category[R] General function prediction only 
COG ID[COG0612] Predicted Zn-dependent peptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.894237 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGACAACT GGACTTTGCC CAACGGCACC CGTTGCGTGG CGGCAGCGAT GCCCGATGCA 
CCGCTCACCT GCCTTGATTT TTGGTGCCAA GCCGGCAGCA GCAGTGAGCA GCCTGGTGAG
GAAGGCATCG CACATTTTCT TGAACACATG GTGTTTAAGG GAAGTCATCG CTTAGCCGCT
GGGGCATTCG ATGAAGCCAT CGAAGCGCTT GGAGGCAGCA GCAATGCAGC CACTGGATTC
GACGACGTGC ACTTTCACGT TTTGATCCCA CCAGATCGAG CAGCGGAGGC TTTGGATTTA
CTGCTCGAAC TTGTGCTGCA ACCGGCCCTC GACCCGCAGG GCTTTTCAAC AGAAAGAGAT
GTGGTGCTCG AAGAGATTGC CCAATATGCC GACCAACCCA CTGAGCAAGT GCTGCAAAGC
ATCTTGAGTT TGGGTTGCGG AGACCATTCC TACGGCCGAC CCATTCTCGG CAAGGTTGCA
ACGCTCAACG CCATGGAGCC CAGCCTGATG CGGCGGTTTC ACCAACGGCG TTACCTCGGG
CCAAATTGCA CCCTGGCCCT GGCTGGCCCT GCCCCAGAAA CGCTCAAACC AACCATCGCA
GCATCGGCCT TGGCGGACCT TCCAGGAGAT CGAAACGAGC CCAGCTCGCA TCAACCCTTG
CCACTGATGC TTCACGCCGG CCGCCACACG CAACGGGTCG ACCGTTTGGA ATCGGCGCGA
ATTTTGATGC TTTGGACGAC AGCGCCTGCC CACAACCAGG AGGCCGTTAT GGGAGCAGAT
CTCGCGACAA CACTGTTAGG TGAGGGAAGA AGAAGTCGTC TGGTGGAGCG TTTACGGGAG
GAGCTTCAAT TGGTTGAAAG TATCTCGATG GACCTCACAG CCTTGGAGGA GGGGAGCCTC
ATCACCCTGG AAGTGATCTG CCCAGAAGAT GCATTATCCG CAGTTGAACA AGAGATCAAT
GCAGTGCTGC ATCAAGTGGC AGACGAAGCC GTTTCAGAAC AAGAGTTACG GCGTGGGTAC
CAGCTGGTGA GCAATAGCCT CCGCTACTCG TTGGAATCTG TCGGACATGT GACCGGTCTT
TGTGCCAGCC ACGTGCTTTG GCATCGCAAC CAAGACTTGT TATCTCCCTT AAACCATCTG
AACCATTGGA GTGCCGAACG ACTGCAGACC GAACTATTCC CTGCGCTTCT GCCTGAAAAG
GCCTGTGTGT TGATTGCTCG CCCTGGAGCC AACCAGTGA
 
Protein sequence
MDNWTLPNGT RCVAAAMPDA PLTCLDFWCQ AGSSSEQPGE EGIAHFLEHM VFKGSHRLAA 
GAFDEAIEAL GGSSNAATGF DDVHFHVLIP PDRAAEALDL LLELVLQPAL DPQGFSTERD
VVLEEIAQYA DQPTEQVLQS ILSLGCGDHS YGRPILGKVA TLNAMEPSLM RRFHQRRYLG
PNCTLALAGP APETLKPTIA ASALADLPGD RNEPSSHQPL PLMLHAGRHT QRVDRLESAR
ILMLWTTAPA HNQEAVMGAD LATTLLGEGR RSRLVERLRE ELQLVESISM DLTALEEGSL
ITLEVICPED ALSAVEQEIN AVLHQVADEA VSEQELRRGY QLVSNSLRYS LESVGHVTGL
CASHVLWHRN QDLLSPLNHL NHWSAERLQT ELFPALLPEK ACVLIARPGA NQ