Gene Syncc9902_1253 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_1253 
Symbol 
ID3743057 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand- 
Start bp1217018 
End bp1217758 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content52% 
IMG OID637771433 
Productphycocyanobilin:ferredoxin oxidoreductase 
Protein accessionYP_377261 
Protein GI78184826 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.904457 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGCCTC AGTCGAAGGA TCCCTGTCAG GAACTGCATC CTCTGGTGTC GACGCTCGCA 
GCGTCCATCC GTTCGTCTTG GCAAAAACTT CCAGAACTTG CACCGTTATG CACCGCTGAC 
GACCTCAAGG CGATTCATGG AGAACTCGAC GGTGAAACGC TTTTTATTGG CAACGAGCTG 
TATCAGTGCC GAGGTTTTCG CAAAATTCAC CTGGAAATAG CAAGACTCGG CAACGGCTTG 
CAGATTCTTC ACTGCGTTTG GTTTCCTGAT CCTCAATACG ACTTACCGAT TTTTGGTGCC 
GATATCGTTG CGGGTCCTGC GGGGATATCA GCGGCGATTG TTGACCTATC GCCGACATCG 
GGCGAGTTAC CAGATCCAGT GTTTAAAGGC CTTGAGGCGA TTGAAAGGCC AGCATTTCGT 
CAGGTGCGAG ACCTGCCTGG ATGGGGGACA ATTTTTTCAA GCAAGGTTTG TTTCATTCGG 
CCAGATGGAG CCGACGAAGA GGCTCTTTTT AATCAGGTCG TAATCGACTA TCTCGAGGTT 
CTTTCCGATT GTGCCTCGCG CGCAAATCCC GAATCACCAA CAACCGTTTC TACGATCAAC 
CGGTATGAAG GCCAACTGAA CTACTGCCTT CAACAGAAGC GCAACGACAA AACCCGCCGG 
GTGCTCGAGA AAGCGTTCGA TCCAGAGTGG GCCGATCGGT ATATCGAGCT TCTGCTGTTT 
GATAACCCGC CAACTCCTTA A
 
Protein sequence
MQPQSKDPCQ ELHPLVSTLA ASIRSSWQKL PELAPLCTAD DLKAIHGELD GETLFIGNEL 
YQCRGFRKIH LEIARLGNGL QILHCVWFPD PQYDLPIFGA DIVAGPAGIS AAIVDLSPTS 
GELPDPVFKG LEAIERPAFR QVRDLPGWGT IFSSKVCFIR PDGADEEALF NQVVIDYLEV 
LSDCASRANP ESPTTVSTIN RYEGQLNYCL QQKRNDKTRR VLEKAFDPEW ADRYIELLLF 
DNPPTP