| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_1250 |
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| Symbol | |
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| ID | 3743054 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9902 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007513 |
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| Strand | - |
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| Start bp | 1214223 |
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| End bp | 1214936 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637771430 |
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| Product | ATPase |
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| Protein accession | YP_377258 |
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| Protein GI | 78184823 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | [TIGR02982] ABC exporter ATP-binding subunit, DevA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00443791 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTGTTG CTCTCAACTT TGATTCGGCG CCGCCGGCGG TGTCGATTGA CACCTTGAGC
CATTCCTTCG GTCAGGGTTC GATGCGCCGT CAGGTTCTCG AGAACATTTC CCTACGGATC
AATCCCGGAG AGGTTGTGTT GCTAACAGGA CCCTCGGGAT GCGGCAAAAC AACCCTGCTC
ACCTTGATTG GTGCCTTACG CACGGTGCAA CAGGGGTCGG TGAATGTGCT CGGTCAACGC
TTAGACGGCG CCGGACGTCG CAGCCGCCAA CAAGTGCGCC GTCGCATTGG CATGATTTTC
CAGGGCCACA ACCTGTTGCG GTGCCTTACG GCAGAACAGA ACGTGCAAAT GGGTGCGGAC
CTGTTGCCAG ATCTCACCTA TCGAGCGCGA AGGAACGAAG CCCGTACCTG GCTAAGGGCG
GTTGGTTTAG ATGATCAGCA AATGGGTCAG TTGCCCCATG ATTTGTCCGG TGGTCAAAAA
CAACGTGTAG CGATTGCCCG TGCCCTCGCA GCCCATCCAC GTTTGCTTTT GGCTGATGAG
CCCACCGCAG CATTGGACAG CAGAACCGGA CGAGAAGTGG TGGATCTGCT CAAGAAACTG
GCTCGGGAGC AAGCGTGTGC AGTGTTGATG GTGACCCATG ATCCGCGCAT TTTGGATGTG
GCCGACCGAC TTCTCGAAAT GGAAGATGGC TGTTTATTGC CTGCTGTTCA GTAA
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| Protein sequence | MSVALNFDSA PPAVSIDTLS HSFGQGSMRR QVLENISLRI NPGEVVLLTG PSGCGKTTLL
TLIGALRTVQ QGSVNVLGQR LDGAGRRSRQ QVRRRIGMIF QGHNLLRCLT AEQNVQMGAD
LLPDLTYRAR RNEARTWLRA VGLDDQQMGQ LPHDLSGGQK QRVAIARALA AHPRLLLADE
PTAALDSRTG REVVDLLKKL AREQACAVLM VTHDPRILDV ADRLLEMEDG CLLPAVQ
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