Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9902_1241 |
Symbol | |
ID | 3742695 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9902 |
Kingdom | Bacteria |
Replicon accession | NC_007513 |
Strand | - |
Start bp | 1202995 |
End bp | 1205157 |
Gene Length | 2163 bp |
Protein Length | 720 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637771421 |
Product | glycyl-tRNA synthetase, beta subunit |
Protein accession | YP_377249 |
Protein GI | 78184814 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0751] Glycyl-tRNA synthetase, beta subunit |
TIGRFAM ID | [TIGR00211] glycyl-tRNA synthetase, tetrameric type, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.232901 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACAACAA CGTTTCTTCT TGAAATCGGC ACTGAAGAAT TGCCGGCGGA TTTTGCGCGT CAAGCGCTCG ACCAACTCCG AGAACGGGTT CCGCACGACC TTGCTGAAGC ACGGTTGAGC CATGGATCGA TTTCGATCTT TGGAACCCCA CGCCGATTGG TGGTGTCGAT CCCCGACTTG GACGACCGTC AACCCGATCT CCGTGAAGAG CGAAAAGGTC CTCCGGTTGC TCAGGCTTTC AAAGATGGTG TTCCAGGCCC TGCAGCGATT GGCTTTGCCA AACGCTGCGG CATCGATGCA TCACAGCTCG AGCAACGCGA TACACCCAAA GGTCCGTGTG TCTTCGCCAC TGTGTTGACG GCAGGGCGCG ACGGTGTGTC CTTGCTTCGC GAGCTAATCC CAACGTGGAT TGATGCACTG CAGGGCCGTC GCTTTATGCG ATGGGGAACG GGGACCCAGC GCTTCAGTCG ACCAATTCGT TGGTTGGTAG CGCTCCATGG CGACGATGTG ATCAATGTGG AGATGCCTGG GGCAGACCCC GTGGTTCGAA GCGACCGCTA CAGCCGCGGC CATCGTCTCT ATGGCAACCA ACAGTTGTGT ATTGCGTCGG CGGATCAGTA CGTCAAAACC CTTCAAAAGG CTGGCGTTTT GGTGGATCGC GACGAACGAT CTCGTCTAAT CCGAGCGTCG ATTGATCAAG GGGCTGAAGC CGCAGAGGGG GAGGCCAACT GCCCGGACCG ACTTTTTGAA GAACTCGTTG ATCTTGTTGA AGATCCCCGG GTTTTGCAGG GGCAAATTGC GGAGCGATTT CTGCAATTAC CCCCTGAGGT GATTTCCACC GTGATGCAAG CGCATCAGCG CTATGTGCCG TTGGAGATTC CAGGACTCGA CCCAGACCCG TTGCGATTAA CGGCCGAGGC GGTCCTGCGC CCTGAGTTTT TGTTGGTGGC GAATGGCCTT GAGCAGGCCT CGGCGTTGAT TACCCGGGGG AATGAGCGGG TCTTAGGGGC CCGTCTTGCC GATGCTGAGT TTTTCCTCGA GGTTGATCGA CGTCAGGCCA GTGCAACGCG TCGTGAGGCT CTAAGCCGCG TCACGTTTGC CGAGGGGCTT GGCAGTCTTC GTGATCGTTG TGATCGGATT GAGCGCCTCA CAAACCAGCT CTTAACAGAC CTTGCGCTGT CGGATTCGGT TGCTATGGCG TCTCGTCGTG CGGCACATCT GTGCAAGCAC GATCTTGTTA GTCAGATGGT GGGTGAATTC CCTGAACTTC AGGGGTTGAT GGGAGGCAAA TACCTACTGG AGGAAGGCGA ATCGCGCGAT GTGGCGCTGG CGGTTGTGGA GCACTACTTA CCCCGGGGTG CAGGGGACGA ATTGCCGAGC ACTGATGCTG GTGCCGTTGT GGCCCTGGCT GAGCGATTTG AGCTGTTACT CAGCATTTTC GCTAAAGGGG AACGCCCCAC TGGCTCATCC GATCCCTACG CCCTACGTCG GGCGGGCAAC GGTGTGCTGC TCATTCTTTG GAATCAAGGC TGGAAACTCG ATCTCAATGT CTTTCTTGCC AAGGCCGTTG AAGCCTGGAG AGAGCTTTTT CCAGCTTTTG CGGTGGACAC AGCCCAACTG ACCAGCGATC TTTCAGCCTT GTTGCGACAG CGCATTACAT CGCAACTCGA AGACGATGGT TATGCCGCCG ATTTGGTTCA GGCGGTGGCT GGCGACACCG TTTCGACGAC GCGTCTGTTG CACGATCCCC TGGATGTGCG GGTTCGTATT CAACTGCTGC ACGGATTGAG AGATCAGGGT CGATTAACGG CAGTGCAAGC GGTGGTTCAG CGTGCTTCTC GGTTGGCTGA AAAGGGTGAC CTACCTCTGG ATGTGTTGTC CAGCACTGAA GTGGTGGACC CTTCGCGGTT TGAGTCGGCC AGTGAGAAGG GGCTGTTCGA TGCCACCGAA CGATTGAACC CCCTCGCTGA ACGTGGTGCC TATCAAGAAC TCTGTGACGT TCTTGTGGAA TCCACACCGG CACTTGAGGC GTTCTTTGAT GGTGACCAGA GTGTGATGGT GATGGCCGAT GATCCGGCCC TTCGAATGAA CCGACTCAAT TTGCTCGGTG TGTTACGCAA TCAAGCAGCT GTCTTTGCTC AATTCGAGTT GATTCAAAGC TGA
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Protein sequence | MTTTFLLEIG TEELPADFAR QALDQLRERV PHDLAEARLS HGSISIFGTP RRLVVSIPDL DDRQPDLREE RKGPPVAQAF KDGVPGPAAI GFAKRCGIDA SQLEQRDTPK GPCVFATVLT AGRDGVSLLR ELIPTWIDAL QGRRFMRWGT GTQRFSRPIR WLVALHGDDV INVEMPGADP VVRSDRYSRG HRLYGNQQLC IASADQYVKT LQKAGVLVDR DERSRLIRAS IDQGAEAAEG EANCPDRLFE ELVDLVEDPR VLQGQIAERF LQLPPEVIST VMQAHQRYVP LEIPGLDPDP LRLTAEAVLR PEFLLVANGL EQASALITRG NERVLGARLA DAEFFLEVDR RQASATRREA LSRVTFAEGL GSLRDRCDRI ERLTNQLLTD LALSDSVAMA SRRAAHLCKH DLVSQMVGEF PELQGLMGGK YLLEEGESRD VALAVVEHYL PRGAGDELPS TDAGAVVALA ERFELLLSIF AKGERPTGSS DPYALRRAGN GVLLILWNQG WKLDLNVFLA KAVEAWRELF PAFAVDTAQL TSDLSALLRQ RITSQLEDDG YAADLVQAVA GDTVSTTRLL HDPLDVRVRI QLLHGLRDQG RLTAVQAVVQ RASRLAEKGD LPLDVLSSTE VVDPSRFESA SEKGLFDATE RLNPLAERGA YQELCDVLVE STPALEAFFD GDQSVMVMAD DPALRMNRLN LLGVLRNQAA VFAQFELIQS
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