| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_1236 |
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| Symbol | |
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| ID | 3742690 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9902 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007513 |
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| Strand | - |
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| Start bp | 1196043 |
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| End bp | 1197845 |
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| Gene Length | 1803 bp |
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| Protein Length | 600 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637771416 |
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| Product | GTP-binding protein TypA |
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| Protein accession | YP_377244 |
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| Protein GI | 78184809 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1217] Predicted membrane GTPase involved in stress response |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00485] translation elongation factor TU
[TIGR01394] GTP-binding protein TypA/BipA |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.292914 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGCCC AGCAAAAGGC GATTCGCAAT ATCGCGATCA TCGCCCACGT TGATCATGGC
AAAACGACCT TGGTCGACGC CCTGCTGGCG CAATCCGGAA TCTTCCGCGA CAACGAAGCT
GTTCCGACGT GCGTTTTGGA CTCCAACGAT TTGGAGCGTG AGCGCGGCAT CACCATTCTT
TCGAAGAATG CAGCTGTTAC TTACAACGAC ACGCGGATCA ACATTGTTGA TACCCCTGGC
CACGCTGATT TTGGTGGTGA GGTGGAGCGG GTTCTCGGCA TGGTTGACGG GTGCTTGCTC
ATCGTTGATG CCAACGAGGG CCCGATGCCC CAAACCCGCT TTGTGCTCAA GAAAGCCCTG
GAGCAGGGCT TAAGACCGAT CATCTTTGTG AACAAGATTG ATCGGCCCCG GGTTGATCCC
GAAACCGCCG TCGACAAGGT GCTCGATCTG TTTATCGAGC TGGGTGCGGA TGATGACCAG
TGTGATTTCC CCTATTTATT TGGTAGCGGT CTTGGTGGTT TTGCCAAGCC AGATATGAAA
ACAGAGAGCG AGAATATGCG TCCTCTCTTT GATGCGATTC TCCGTCATGT CCCGCCCCCA
GTTGGCGATG TAACCAAGCC ACTCCAGCTT CAAATTACAA CTCTCGATTA TTCAGACTTT
CTGGGTCGAA TCATCATTGG TCGAGTTCAT AATGGTGTGA TTCGCAAAGG GCAAAATGCG
TCCTTGATCA AGGACGACGG AAGTCTTAAA AAGGGAAGAA TTAGCAAATT ATTAGGCTTT
GAGGGCCTTC AACGGGTTGA TATTGATGAG GCCTCCGCTG GTGATCTTGT TGCGGTTGCT
GGCTTTGATG ATGTCAACAT CGGCGAAACG ATCGCCTGCC CTGATGAACC GAAGGCTTTG
CCTCTGATCA AGGTGGATGA ACCTACCCTT CAGATGACAT TCGTCGTCAA CGATTCCCCT
TTTGCTGGAA AAGAAGGAAA GTTCGTTACG AGCCGTCAGA TCCGAGACCG CCTGCAGCGA
GAATTACTCA CGAACGTTGC GCTAAGGGTT GAAGATACGG ACTCTCCAGA CAGCTTCGCT
GTCAGCGGAC GGGGAGAACT CCACCTGGGA ATTTTGATTG AAACGATGCG CCGGGAGGGC
TTCGAGTTTC AAGTGTCCCA ACCTCAGGTG ATCTTTCGCA CAATCGATGG AACACCGTGC
GAGCCAGTTG AAACCCTCGT CATGGATGTG CCTGAGGCTG CGGTTGGATC CTGTATCGAA
AAGCTTGGAA CCCGTAAGGC AGAAATGCAA AATATGGAAA CAGGAACTGA TGGTCGAACC
CAACTGGAGT TTGTTGTTCC TTCACGGGGA TTAATTGGTT TCCGTGGCGA ATTTATTCGT
GCCACAAGAG GTGAGGGAAT TATGAGCCAT TCCTTCTTTG AGTATCGGCC AATGTGTGGC
GAATTTGATA CTCGTAGAAA TGGTGTTTTG ATTGCATTTG AAGAAGGAAC AGCAACGTTC
TATGCATTGA AGAATGCCGA AGATCGCGGA CAGTTCTTTA TCACACCTGG CACAAAGGTC
TACAAAGGAA TGATTATTGG TGAAAATACC CGTCCGCAAG ATATGGAAAT CAATATTTCT
AAGGCAAAGC AAGTTACGAA TATCCGCTCC GCAGGTGCCG ATGTCTTGGA TACTCTCCAA
TCTCCAATTC AGATGACCCT GGAGCGTGCA CTGGAATACA TCGGACCCGA TGAAATGCTT
GAAGTCACTC CAGAGTCGAT TCGTTTACGC AAATTGCCTG CCAAAAAGAT GGCAAAACGT
TGA
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| Protein sequence | MSAQQKAIRN IAIIAHVDHG KTTLVDALLA QSGIFRDNEA VPTCVLDSND LERERGITIL
SKNAAVTYND TRINIVDTPG HADFGGEVER VLGMVDGCLL IVDANEGPMP QTRFVLKKAL
EQGLRPIIFV NKIDRPRVDP ETAVDKVLDL FIELGADDDQ CDFPYLFGSG LGGFAKPDMK
TESENMRPLF DAILRHVPPP VGDVTKPLQL QITTLDYSDF LGRIIIGRVH NGVIRKGQNA
SLIKDDGSLK KGRISKLLGF EGLQRVDIDE ASAGDLVAVA GFDDVNIGET IACPDEPKAL
PLIKVDEPTL QMTFVVNDSP FAGKEGKFVT SRQIRDRLQR ELLTNVALRV EDTDSPDSFA
VSGRGELHLG ILIETMRREG FEFQVSQPQV IFRTIDGTPC EPVETLVMDV PEAAVGSCIE
KLGTRKAEMQ NMETGTDGRT QLEFVVPSRG LIGFRGEFIR ATRGEGIMSH SFFEYRPMCG
EFDTRRNGVL IAFEEGTATF YALKNAEDRG QFFITPGTKV YKGMIIGENT RPQDMEINIS
KAKQVTNIRS AGADVLDTLQ SPIQMTLERA LEYIGPDEML EVTPESIRLR KLPAKKMAKR
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