Gene Syncc9902_1228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_1228 
SymbolhemA 
ID3742682 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp1187700 
End bp1188998 
Gene Length1299 bp 
Protein Length432 aa 
Translation table11 
GC content52% 
IMG OID637771408 
Productglutamyl-tRNA reductase 
Protein accessionYP_377236 
Protein GI78184801 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0373] Glutamyl-tRNA reductase 
TIGRFAM ID[TIGR01035] glutamyl-tRNA reductase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATATAG CCGTCGTCGG CCTCAGTCAT CGCACGGCTC CGGTGGAAAT CCGGGAAAGG 
CTCAGTATTC CTGAGCAGAG CATGGAAATG TCTCTCAAAA CCCTTCGGGG AAACGACCAG
GTGCTTGAGG CGTCAATCCT CAGCACCTGC AATCGTCTTG AGATCTATAC CTTGGTTCGC
CACCCTGAAC TTGGTGTGGG AGCTGTCAAT GAATTTTTGA GCAACCACTC TGGTTTGCAA
ACTGGAGAAT TGTCTCCTCA TTTATTCAAC TTTCATCATC AAGATGCGGT TGATCATTTG
CTACGAGTTG CTGCCGGTTT AGACAGTCTT GTTCTGGGAG AAGGTCAAAT CCTTTCCCAG
GTTAAAAAGA TGATGCGGCT TGGGCAGGAA CATAAATCCC TGGGCCCGAT CTTGAATCGA
TTGCTCACAC AAGCGGTTAC GACTGGAAAA AAAGTTCGCA GCGAAACGAA TTTAGGAACT
GGTGCCGTAT CCATCAGTTC GGCGGCCGTT GAACTCGCAC AACTCAAGTT GGGTCAGTCT
CGCGGCGTTG ACGACTTGGT CAGCCTTGAA AGTGAGCAGA TCGCTGTTGT GGGGGCAGGT
CGGATGAGTC GACTACTTTT GCAGCACCTT CAAGCGAAGG GCGCATCAGG CGTTGTTCTT
GTTAATCGAA CCGTTGAAAC TGCTGAGCGT CTCGCCAACG ATTTCCCGGA TTTATCTGTT
GAGTGCAGGC CCCTAACTGA CCTCAACACC TTTCTCAGCA CATCCTCTCT TGTCTTCACC
AGCACGGCTG CTGAAGATCC AATTATTGAT GCATCGCGAC TCAAGCCCCT CAATCGACGC
AGTCAGCTTC GCTTAATTGA TATTGGTGTG CCCCGCAACG TTGCTGCCGA TGCAGCGACC
GTTGATGGCG TTGAATCCCA CGATGTTGAT GATCTCGAAG AGGTTGTTGC ACGCAACCAG
GAAGCGCGGC AGGCCATCGC CCGTGAGGCT GAGCATCTGC TCCAGGATGA AGCTCAACAG
TTCCTCGACT GGTGGGACAG CCTTGAGGCG GTTCCCACCA TCAATCAATT GCGGTCGTCG
ATGGAAACGA TTCGCACTGA GGAATTGCAA AAAGCACTGA GCCGTATGGG ACCAGACTTT
TCAGCGCGTG AGCGCAAGGT TGTTGAGGCT TTAAGCAAAG GCATCATCAA CAAAATTCTC
CACACCCCTG TGACCAAATT GAGGGCTTCA CAAGCCCGTA GCGAGCGCCA ACAGGCGCTT
CGTGCCGTCG AGCGACTCTT TGATCTAGAC CCTTCCTGA
 
Protein sequence
MHIAVVGLSH RTAPVEIRER LSIPEQSMEM SLKTLRGNDQ VLEASILSTC NRLEIYTLVR 
HPELGVGAVN EFLSNHSGLQ TGELSPHLFN FHHQDAVDHL LRVAAGLDSL VLGEGQILSQ
VKKMMRLGQE HKSLGPILNR LLTQAVTTGK KVRSETNLGT GAVSISSAAV ELAQLKLGQS
RGVDDLVSLE SEQIAVVGAG RMSRLLLQHL QAKGASGVVL VNRTVETAER LANDFPDLSV
ECRPLTDLNT FLSTSSLVFT STAAEDPIID ASRLKPLNRR SQLRLIDIGV PRNVAADAAT
VDGVESHDVD DLEEVVARNQ EARQAIAREA EHLLQDEAQQ FLDWWDSLEA VPTINQLRSS
METIRTEELQ KALSRMGPDF SARERKVVEA LSKGIINKIL HTPVTKLRAS QARSERQQAL
RAVERLFDLD PS